Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 303 a.a., Site-specific tyrosine recombinase XerD from Variovorax sp. SCN45

 Score = 67.8 bits (164), Expect = 3e-16
 Identities = 62/201 (30%), Positives = 95/201 (47%), Gaps = 20/201 (9%)

Query: 86  LRIREVKPATGSRLPPGRNLRRSLI----RELMDVCAADP--RPQGVRDAAIIALLYGTG 139
           LR R +      RL P R + R++     +++ D+ AA     P G+RD A++ L+Y +G
Sbjct: 93  LRERRIAADPSIRLMPARQMPRAIKTLSEKQVDDLLAAPDVESPLGLRDRAMLELMYASG 152

Query: 140 MRKSESVDIDLDQVDFEARSLQVVGKGNHQLVKYAPPWAFEKLQAWLELRRQDLPAGAED 199
           +R SE V +    +      L+V+GKG+ + +      A   ++ +LE  R  +  G + 
Sbjct: 153 LRVSELVALKAIDMSLNDGVLRVLGKGSKERLVPFGGEARRWIERYLEESRPAILDG-QQ 211

Query: 200 DPFLFNRIRRGNHITRAR----ITKHAIYYIARQRGAQVGVKIMPHDFRRAFITRVIEEH 255
            P LF    RG  +TR      + KHA         A + V + PH  R AF T ++   
Sbjct: 212 TPDLF-VTARGAGMTRVMFWIIVKKHA-------TAAGIHVPLSPHTLRHAFATHLLNHG 263

Query: 256 -DLSIAQKLAHHANIQTTAIY 275
            DL   Q L  HA+I TT IY
Sbjct: 264 VDLRAVQLLLGHADISTTTIY 284