Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 299 a.a., Tyrosine recombinase XerC from Pseudomonas putida KT2440

 Score = 95.5 bits (236), Expect = 1e-24
 Identities = 81/247 (32%), Positives = 119/247 (48%), Gaps = 17/247 (6%)

Query: 35  WHRLEPGHVIALVAALRADGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPA 94
           W  L+   +  L+A L   G +P S +  ++A+RG+     R+GL  H+    +    P 
Sbjct: 45  WQALQIQQLRQLIARLHHHGQSPRSLARLLSAVRGLYRYLNREGLCQHDPANGLSA--PK 102

Query: 95  TGSRLPPGRNLRRSLIRELMDVCAADPRPQGVRDAAIIALLYGTGMRKSESVDIDLDQVD 154
              RLP   +  R+L  +L+D    D      RD AI+ L Y +G+R SE  ++DLD +D
Sbjct: 103 GERRLPKVLDTDRAL--QLLDG-GVDDDFIARRDQAILELFYSSGLRLSELTNLDLDHLD 159

Query: 155 FEARSLQVVGKGNHQLVKYAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHIT 214
             A  +QV+GKG    V      A E LQAW  LR      G   D  +F   R+GN   
Sbjct: 160 LAAGLVQVLGKGGKARVLPVGRKAREALQAWYRLR----GIGNPRDRAVF-ITRQGN--- 211

Query: 215 RARITKHAIYYIARQRG-AQVGVKIMPHDFRRAFITRVIE-EHDLSIAQKLAHHANIQTT 272
             RI+  A+    +  G  ++G  + PH  R +F + V+E   DL   Q++  HA+I TT
Sbjct: 212 --RISPRAVRLRVKVAGERELGQHLHPHMLRHSFASHVLESSQDLRAVQEMLGHADISTT 269

Query: 273 AIYDRRD 279
            IY   D
Sbjct: 270 QIYTHLD 276