Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 298 a.a., Tyrosine recombinase XerD from Pseudomonas putida KT2440

 Score = 76.6 bits (187), Expect = 6e-19
 Identities = 65/224 (29%), Positives = 109/224 (48%), Gaps = 13/224 (5%)

Query: 54  GFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPATGSRLPPGRNLRRSLIREL 113
           G+ P S++ +++ +RG      R+ L+  +  L++    P  G  LP  ++L  + +  L
Sbjct: 67  GYKPRSTARFLSGLRGFFRYLLREKLVAIDPTLQVD--MPQLGKPLP--KSLSEADVEAL 122

Query: 114 MDVCAAD-PRPQGVRDAAIIALLYGTGMRKSESVDIDLDQVDFEARSLQVVGKGNHQLVK 172
           +   A D     G RD A++ +LY  G+R +E V + LDQV+     L+V+GKG+ + + 
Sbjct: 123 LQ--APDLGEAIGQRDRAMLEVLYACGLRVTELVSLTLDQVNLRQGVLRVMGKGSKERLV 180

Query: 173 YAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHITRARITKHAIYYIARQRGA 232
                A   L+ +    R +L  G   D    +  +RG  +TR     H I + AR  G 
Sbjct: 181 PMGEEAVVWLERYQRDGRAELLNGRPSDVLFPS--QRGEQMTRQTFW-HRIKHHARVAG- 236

Query: 233 QVGVKIMPHDFRRAFITRVIEE-HDLSIAQKLAHHANIQTTAIY 275
            +   + PH  R AF T ++    DL + Q L  H+++ TT IY
Sbjct: 237 -IDKPLSPHTLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIY 279