Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 300 a.a., Tyrosine recombinase XerC from Salmonella enterica subsp. enterica serovar Typhimurium str. MS1868

 Score = 83.6 bits (205), Expect = 5e-21
 Identities = 74/261 (28%), Positives = 121/261 (46%), Gaps = 45/261 (17%)

Query: 35  WHRLEPGHVIALVAALRADGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPA 94
           W + +   V +     R  G  P S +L ++A+R   +    QG +         +  PA
Sbjct: 50  WQQCDAAIVRSFAVRSRRKGLGPASLALRLSALRSFFDWLVSQGEL---------KANPA 100

Query: 95  TGSRLPPG-RNLRRSL----IRELMDVCAADPRPQGVRDAAIIALLYGTGMRKSESVDID 149
            G   P   R+L +++    +  L+D+   DP    VRD A++ ++YG G+R SE V +D
Sbjct: 101 KGVSAPKAPRHLPKNIDVDDVNRLLDIDLNDPL--AVRDRAMLEVMYGAGLRLSELVGLD 158

Query: 150 LDQVDFEARSLQVVGKGNHQ----LVKYAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFN 205
           +  +D +   + V+GKG+ +    + + A  W    ++ WL+LR   L A  E+  FL  
Sbjct: 159 IKHLDLDTGEVWVMGKGSKERRLPIGRNAVTW----IEHWLDLR--GLFASDEEALFL-- 210

Query: 206 RIRRGNHITRARITKHAIYYIARQRGAQVGVK------IMPHDFRRAFITRVIEEH-DLS 258
             + G  I+   + K         R A+ G+K      + PH  R +F T ++E   DL 
Sbjct: 211 -SKLGKRISARNVQK---------RFAEWGIKQGLNSHVHPHKLRHSFATHMLESSGDLR 260

Query: 259 IAQKLAHHANIQTTAIYDRRD 279
             Q+L  HAN+ TT IY   D
Sbjct: 261 GVQELLGHANLSTTQIYTHLD 281