Pairwise Alignments

Query, 292 a.a., Site-specific recombinase, phage integrase family from Pseudomonas putida KT2440

Subject, 315 a.a., site-specific recombinase from Agrobacterium fabrum C58

 Score = 62.4 bits (150), Expect = 1e-14
 Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 13/240 (5%)

Query: 38  LEPGHVIALVAALRADGFAPNSSSLYVNAIRGVMNEAWRQGLIDHEQLLRIREVKPATGS 97
           L P  + A +A  R +G    S   ++  +R +++   ++GL++      +R   P    
Sbjct: 68  LRPVDLRAFLANRRKEGAGARSLGRHLAGLRSLLHHLQKKGLVNAAGATAMRA--PKQPK 125

Query: 98  RLPPGRNLRRSLIRELMDVCAADPRPQGVRDAAIIALLYGTGMRKSESVDIDLDQVDFEA 157
            LP     R++L     +    +      R+AA+++LLYG G+R SE++ +         
Sbjct: 126 SLPKPLTDRQALKITTAEAQLNEEPWIAARNAAVLSLLYGCGLRISEALGLTPADFPPGT 185

Query: 158 RSLQVVGKGNHQLVKYAPPWAFEKLQAWLELRRQDLPAGAEDDPFLFNRIRRGNHITRAR 217
           RSL++ GKGN   +        E +  + +L    L   A D+P       RG  +  A 
Sbjct: 186 RSLRITGKGNKTRIVPLLAVVTEAVDTYRKLCPYAL---AADEPMFLG--ARGGKLQPAI 240

Query: 218 ITKHAIYYIARQRGA-QVGVKIMPHDFRRAFITRVIE-EHDLSIAQKLAHHANIQTTAIY 275
           I +     + + RGA  +     PH  R +F T ++    DL   Q+L  HA++ TT +Y
Sbjct: 241 IQRE----MQKLRGAFGLPENATPHALRHSFATHLLAGGGDLRTIQELLGHASLSTTQVY 296