Pairwise Alignments

Query, 393 a.a., putative Membrane protein from Pseudomonas putida KT2440

Subject, 395 a.a., hypothetical protein from Agrobacterium fabrum C58

 Score =  104 bits (260), Expect = 4e-27
 Identities = 112/391 (28%), Positives = 169/391 (43%), Gaps = 22/391 (5%)

Query: 14  VWSLSFRPFFLGGSLFALTALLLWAGVLAGAPAP----APPGGMLAWHRHEMLFGFAAAI 69
           + S + R FF   +L       LW  V+ G   P     PP     WH HEM+FG     
Sbjct: 6   ILSEALRLFFPLAALHGAVWPFLWI-VIGGYALPFANAVPPS---QWHAHEMIFGTYGMA 61

Query: 70  IAGFLLTAVQNWSGIPGLSGRALQGLFLLWLLGRVSWFMPL-PGSLLV-LVEGSFLPLVA 127
           +AGFL +AV  W+     +GR L  L  LWL GR+  F+     SLL    + +FL  ++
Sbjct: 62  LAGFLGSAVPEWTDTKAAAGRTLLCLAGLWLPGRLIGFVGADTWSLLAGFFDLAFLLALS 121

Query: 128 LSLARPVLQRRLRNNYPIVVLVLLIAACQWLTLAGWLHQDELWQRRGIFAGLWLVTAMMT 187
           + + + +L RR   +   +V ++L AA +      W   D  +  R + A L +   + +
Sbjct: 122 VLIGKAMLVRRTTKHLAFLVWLILFAAAETGVRYAWWMGDLEFAVRCLEAALCIFIVLFS 181

Query: 188 VLGGRVIPFFTRRGLGQL-DAAPARPWLDRACLLLSVAVPLAFATGLADTPQASLAVLFF 246
           +   R+        L    +  P RP   R   +    V L  A  L        A L  
Sbjct: 182 LSAARINVVVINLALDPSGETTPYRPHPGRQ-HMAGAMVTLYMAAKLLFPESDVCAWLAL 240

Query: 247 ALFALHATRLVLWH-DRGLWRVPLLWSLHLAYAWLALACLGMALWHSGVALNPSLVTHAL 305
           A  A    RL  W   R ++R  +L  L L  A+     L +     G ++  +   H L
Sbjct: 241 AAGAAFFDRLAEWFIGRAVFRTEVL-LLALGNAFAGAGFLALGATRLGFSVTSAAGLHLL 299

Query: 306 TVGAMTGLILAMMARVSLGHTGRPLQ-VPTSIAWAFALMQLATLARVILPLFTSLGV--- 361
           +VGA+   I+A+     L HTGR L+ +P     A ALM +A L R ILP F    V   
Sbjct: 300 SVGALGCAIMAVFIIAGLRHTGRDLKHLPWQAHAAAALMVMAGLTR-ILPEFDVAAVLSP 358

Query: 362 ---SVSALCWSLALLLFLRHYLPILLRPRAD 389
               +SA+ W+ +  ++L+ +LP +  P  D
Sbjct: 359 YHHGLSAILWAASFGIWLQGFLPFMRAPGTD 389