Pairwise Alignments

Query, 323 a.a., Transcriptional regulator, LysR family from Pseudomonas putida KT2440

Subject, 425 a.a., Transcriptional regulator LigR, LysR family from Variovorax sp. SCN45

 Score =  133 bits (335), Expect = 7e-36
 Identities = 90/299 (30%), Positives = 137/299 (45%), Gaps = 3/299 (1%)

Query: 7   HSSFCNWIRYKHLVLIDTLARTRNMHATATRMNLSQPALSKMLRDLEEQFGFALFERLPR 66
           HS F + +  + L ++ +LA+ RNM A A    ++QPA+S  L+DLE   G ALF R  R
Sbjct: 115 HSLFTSILNGRRLAVVASLAQKRNMPAVAREFGITQPAISSALKDLESGLGVALFTRTAR 174

Query: 67  SMPPTELGEYVVRYAQGALAESQQFVDQVNRLRNGGHGFIRVGGIFAATALVLPQAIAAI 126
            + PT  GE V  Y +  L+E +     +        G + VG +      +LP AIA++
Sbjct: 175 GLSPTPAGEIVAFYFKRVLSELRHIGPDIAASEGSLQGSVTVGALPLGRTQILPLAIASL 234

Query: 127 KARSPLLSIEVVEHSSDHLLTMLEQNKLDIMIGRFTEERFGQLFDF--QPLEPEPFSLVV 184
            AR P L +  VE   D L   L    +D ++G       G++ D   Q L  +  S++ 
Sbjct: 235 LARHPQLHVSTVESPYDALAASLRSGDIDFILGAL-RNNAGEVKDLQQQALFEDRISVIA 293

Query: 185 NSEHPLNQLDNTPLEALGDWPWVLYPVGTPIRNRLEQAFRVAGIATPADCVETISMPMFL 244
            + HPL + +      L +  W L   G+P R  LE+ F  A  A P   VET  + +  
Sbjct: 294 RAGHPLARAERIDFRMLREARWTLSRQGSPSRELLERFFSNARQAPPLPAVETGDLAVLR 353

Query: 245 QLLQSAPMIAMLPRSMVAAQLASGQFKELRSPLQVPALEYGVVTRKDEPLSASARAFVE 303
            LL  + M+  +    +  ++  G    L  PL+    E G+  R     S  ARA +E
Sbjct: 354 GLLLESDMLTAISAHQLRYEIRDGSLVVLDFPLEETRREIGLTQRLGAFPSPGARALME 412



 Score = 31.6 bits (70), Expect = 4e-05
 Identities = 28/103 (27%), Positives = 45/103 (43%), Gaps = 5/103 (4%)

Query: 14  IRYKHLVLIDTLARTRNMHATATRMNLSQPALSKMLRDLEEQFGFALFERLPRSMPPTEL 73
           I  +HL     +A   ++ A A  +     A+++ + DLE   G  LF+R  R M     
Sbjct: 21  INLRHLRAFSAVAAAGSVAAAADALYRVASAVTRSVLDLEAALGRPLFDRRARGMALNAY 80

Query: 74  GEYVVRYAQGALAESQQFVDQVNRL--RNGGHGFIRVGGIFAA 114
           GE V+     AL   ++F +   +L  R G  G   V  +F +
Sbjct: 81  GELVL---VRALRIEREFEEARTQLVARGGMDGGADVHSLFTS 120