Pairwise Alignments

Query, 452 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 496 a.a., putative regulator from Pseudomonas putida KT2440

 Score =  103 bits (257), Expect = 1e-26
 Identities = 116/466 (24%), Positives = 190/466 (40%), Gaps = 45/466 (9%)

Query: 12  YRKVYRYLEALIEQAAGVGTCRLPSLRELSRRLRVSLATVQSAYSLLEEEGRVHCLPRSG 71
           Y  +   L A I+Q       RLPS+R LS    VSL+TVQ AY +LE+ G V   P+SG
Sbjct: 24  YLNLAEILGARIKQGLYRPGQRLPSVRALSEEHGVSLSTVQQAYRMLEDSGMVSPRPKSG 83

Query: 72  YYVQNGGKDQAVALARQPP------------------LPTQPLLE-------------RM 100
           Y+V +  +  A+    +P                    P Q +++             + 
Sbjct: 84  YFVSDQRQLPALPAVSRPAQRPVDISQWEQVLELVRSTPRQDVVQLGRGMPDIDSPTLKP 143

Query: 101 LLGHERRLARQRDRSVASWEAL-GSARLRNAVAERYTRCSNQYWHADDVHLAPDVLALLE 159
           LL    +L+R++D     ++ + G+  LR  VA        +   AD V +       L 
Sbjct: 144 LLRSLAQLSRRQDMPGLYYDNIHGNLALREQVARLMLDSGCRLGPADLV-ITTGCHEALS 202

Query: 160 TLLAALALQGGTALVHSPCCWQVLRALARAGMRVLEAPLDARGNPELHALAKLLGSEPVS 219
             + A+   G    V SP     ++ L   GM+ LE P D      L AL   L   P+ 
Sbjct: 203 CSIRAVCEPGDIVAVDSPSFHGAMQTLKGLGMKALEIPTDPVTGISLEALELALEQWPIK 262

Query: 220 LL-IMPSCLGMPQGRLVSPYYQQQLGLLLGQHPVWLLENDLDSELCYDGPPSTRLRDWID 278
           L+ I PSC   P G ++    ++ L  L  ++ V +LE+D+  +L Y  P    L+ + D
Sbjct: 263 LIQITPSC-NNPLGYIMPEARKKALLSLAQRYDVAILEDDVYGDLAYTYPRPRTLKSFDD 321

Query: 279 PRWLLVMGTFEAA------VGAEAPYAYLLSHDTVLAKAFAERAFRLAPLRLQALAHMLG 332
              +L+  +F         +G  AP  YL   + VL   +       +  +L A+A  + 
Sbjct: 322 DGRVLLCSSFSKTLAPGLRIGWVAPGRYL---ERVLHMKYISTGSTASQPQL-AIADFIA 377

Query: 333 KGEIETQLGQQRTDLQRRTQYLAHVLQSQFGQRVVFDIPQGGQMLWVSFCQPLAWDGIAA 392
            G  +  + + R+  QR    +   +   F        PQGG MLWV   + L    +  
Sbjct: 378 AGHYQPHVRRMRSQYQRGRDLMGDWVTRYFPAGTRVSRPQGGFMLWVELPEHLDTLRLNR 437

Query: 393 ALAGSALHALPGEQFGLPGHYPQHLALIWLGGRPDELQLAVRRLAQ 438
           AL    +    G  F   G +   L + +      +++ +VR++ +
Sbjct: 438 ALLEQGVQVAVGSIFSASGKFRHCLRMNFAARPTPQIEASVRKVGE 483