Pairwise Alignments

Query, 452 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 470 a.a., Uncharacterized HTH-type transcriptional regulator YjiR from Escherichia coli ECRC62

 Score =  102 bits (255), Expect = 2e-26
 Identities = 103/441 (23%), Positives = 177/441 (40%), Gaps = 49/441 (11%)

Query: 16  YRYLEALIEQAAGVGTCR----LPSLRELSRRLRVSLATVQSAYSLLEEEGRVHCLPRSG 71
           Y++L  L+ +    G  R    LPS+R LS+   VS++TVQ AY  LE    +   PRSG
Sbjct: 4   YQHLATLLAERIEQGLYRHGEKLPSVRSLSQEHGVSISTVQQAYQTLETMRLITPQPRSG 63

Query: 72  YYV--------------------------------QNGGKDQAVALARQPPLPTQPLLER 99
           Y+V                                +    +  V L++  P    P L +
Sbjct: 64  YFVAQRKAQPPVPPMTRPVQRPVEITQWDQVLDMLEAHSDNSIVPLSKSTPDVETPSL-K 122

Query: 100 MLLGHERRLARQRDRSVASWEALGSARLRNAVAERYTRCSNQYWHADDVHLAPDVLALLE 159
            L     R+ +   ++V  ++ L   R+      R    S     ADD+ +       + 
Sbjct: 123 PLWRELSRVVQHNLQTVLGYDLLAGQRVLREQIARLMLDSGSVVTADDIIITSGCHNSMS 182

Query: 160 TLLAALALQGGTALVHSPCCWQVLRALARAGMRVLEAPLDARGNPELHALAKLLGSEPV- 218
             L A+   G    V SPC +  ++ L   G++V+E P D      + AL   L   P+ 
Sbjct: 183 LALMAVCKPGDIVAVESPCYYGSMQMLRGMGVKVIEIPTDPETGISVEALELALEQWPIK 242

Query: 219 SLLIMPSCLGMPQGRLVSPYYQQQLGLLLGQHPVWLLENDLDSELCYDGPPSTRLRDW-I 277
            ++++P+C   P G ++    ++ +  L  +H + + E+D+  EL  + P    +  W I
Sbjct: 243 GIILVPNC-NNPLGFIMPDARKRAVLSLAQRHDIVIFEDDVYGELATEYPRPRTIHSWDI 301

Query: 278 DPRWLLVMGTFEA-----AVGAEAPYAYLLSHDTVLAKAFAERAFRLAPLRLQALAHMLG 332
           D R LL     ++      VG  AP  Y   HD +L   +A  +F +   ++ A   +L 
Sbjct: 302 DGRVLLCSSFSKSIAPGLRVGWVAPGRY---HDKLLHMKYATSSFNVPSTQMAAATFVL- 357

Query: 333 KGEIETQLGQQRTDLQRRTQYLAHVLQSQFGQRVVFDIPQGGQMLWVSFCQPLAWDGIAA 392
           +G     + + R + QR        ++  F   +    P+GG +LW+   + +    +A 
Sbjct: 358 EGHYHRHIRRMRQNYQRNLALYTCWIREYFPCEICITRPKGGFLLWIELPEQVDMVCVAR 417

Query: 393 ALAGSALHALPGEQFGLPGHY 413
            L    +    G  F   G Y
Sbjct: 418 QLCRMNIQVAAGSIFSASGKY 438