Pairwise Alignments

Query, 452 a.a., Transcriptional regulator, GntR family from Pseudomonas putida KT2440

Subject, 444 a.a., DNA-binding transcriptional regulator from Escherichia coli ECRC101

 Score = 83.2 bits (204), Expect = 2e-20
 Identities = 107/398 (26%), Positives = 164/398 (41%), Gaps = 59/398 (14%)

Query: 12  YRKVYRYLEALIEQAAGVGTCRLPSLRELSRRLRVSLATVQSAYSLLEEEGRVHCLPRSG 71
           Y+ + R L+ +IEQ       RLPS R  S+ L VS +TV++AY+ L  +G +    ++G
Sbjct: 4   YQDIARQLKTVIEQGKLKPGARLPSSRTWSQELGVSRSTVENAYAELVAQGWLVRRGQAG 63

Query: 72  YYV-------QNGGKDQAVALARQPPLPTQ------PLLERMLLGH--ERRLARQRDRSV 116
            +V       Q+     A A   Q PLP Q       L  R L      RRL  Q    +
Sbjct: 64  TFVSEQIHPQQSAVDVVAFAGESQQPLPFQMGLPALDLFPRELWARVMGRRLRTQTRFDL 123

Query: 117 ASWEALGSARLRNAVAERYTRCSNQY-WHADDVHLAPDVLALLETLLAALALQGGTALVH 175
           A  +  G A LR A+ + Y R S       + V +     A +  +L ALA  G    + 
Sbjct: 124 ALGDVCGEAALREAIVD-YLRVSRGIDCQPEQVFITHGYAASMALILHALAQPGDGMWME 182

Query: 176 SPCCWQVLRALARAGMRVLEAPLDARGNPELHALAKLLGSEPVSLLIMPSCLGMPQGR-- 233
            P    +   + R G+ +L  P+D  G                 L +       P  R  
Sbjct: 183 DPGFPLIRPIVTRHGVEILPVPVDDNG-----------------LDVTSGIQNYPDARFA 225

Query: 234 LVSPYYQQQLGLLLG------------QHPVWLLENDLDSELCYDGPPSTRLRDWIDPRW 281
           L++P +Q  LG+ L             +   W++E+D DSE  Y G P   L+    P+ 
Sbjct: 226 LITPAHQSPLGVALSLARRYQILEWAERSQAWIIEDDYDSEFRYHGKPLPALKSLDAPQR 285

Query: 282 LLVMGTFEAAVGAEAPYAYLLSHDTVLAKAFAERAFRLAP-----LRLQALAHMLGKGEI 336
           ++  GTF  A+      A+L+     +++ F ++A  L P     L    LA  + +G  
Sbjct: 286 VIYAGTFSKALFPALRCAWLVVPVEQISQ-FRQQA-SLEPCAVPVLWQNTLADFIREGHF 343

Query: 337 ETQLGQQRTDLQRRTQYLAHVLQSQFGQRVVFDIPQGG 374
              L + R    +R Q++   L  Q G +VV   PQ G
Sbjct: 344 WRHLKKMRQHYAQRRQWIEQALTQQ-GFQVV---PQKG 377