Pairwise Alignments

Query, 155 a.a., putative Integrase from Pseudomonas putida KT2440

Subject, 399 a.a., Integrase from Variovorax sp. SCN45

 Score = 39.3 bits (90), Expect = 7e-08
 Identities = 34/146 (23%), Positives = 63/146 (43%), Gaps = 22/146 (15%)

Query: 7   GFRGALNNHILPTIGSIPVSEIKLDHIIEIIATLRRARTLAMAKRVRTIIRAVLGFAEGR 66
           G++  ++  I+P +G + V ++K   +    A  + A   A A R  +++R +   AE  
Sbjct: 123 GYQAVIDRCIVPMLGRLKVQDVKRPDVAT--AMKKMAHKPAEANRAFSVMRKMFNLAEV- 179

Query: 67  GWVERNVALSNTEEL------KVRHVVTSNPAIERPADLGEFLLRLDELSPSS-----IS 115
            W  R    +    +      K  H+++         D+G+   RL+ +         I 
Sbjct: 180 -WGHRPDGTNPCRHVPMYPNGKATHLISDE-------DMGKLFRRLEHIEAEGLENYVIP 231

Query: 116 IAMRLLVMLPVRPGELVKMRWEDVDL 141
           +A+RL      R  E+V +RW+ VDL
Sbjct: 232 LAIRLQFEFAGRRSEIVTLRWDWVDL 257