Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 463 a.a., transporter from Pseudomonas simiae WCS417

 Score =  353 bits (905), Expect = e-102
 Identities = 197/457 (43%), Positives = 276/457 (60%), Gaps = 2/457 (0%)

Query: 10  PIVLALTLAGC-SLTPTYQRPEAPVAAEWGDAAG-HTGHSVEQLDWQAFIVDPVLRQLVG 67
           P++ A+ L GC +L P Y+RPEAPV+ +W  AA    G     + WQ F  D  L QL  
Sbjct: 6   PLLAAMALGGCVNLAPQYERPEAPVSEQWLPAANLPKGKVGADIKWQQFFTDRRLAQLQQ 65

Query: 68  TALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSST 127
            AL NNR LR   L++E+A+AQYRI+RAD  P ++A  SG     P +LS+ G    +  
Sbjct: 66  LALANNRDLRLASLNVEKAQAQYRIKRADLFPTVDAGVSGTHSRTPGSLSNTGTAVTTHD 125

Query: 128 YQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERR 187
           Y   L L  YE+D+FGRV++L D ALE YLA  E  R+ +I+L+AEV+ A+L L     R
Sbjct: 126 YSAQLGLSSYELDVFGRVRNLRDEALEDYLALTETRRSTQISLVAEVATAWLTLAADNER 185

Query: 188 QALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNAL 247
             L ++TL S+  +  L  +  A G ++AL   +A   VE +R ++     Q  Q  NAL
Sbjct: 186 LLLAQETLTSQLATYDLTQRSYALGGSSALSVAQAQTTVESARGDVASYESQILQDRNAL 245

Query: 248 VLLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIGAAR 307
            LL+GS      +P  R +   VL DI  G PS+L+++RPD+L+AEH L++ N DIGAAR
Sbjct: 246 RLLVGSDLPEALLPGTRLESAAVLVDIPAGLPSSLLQQRPDVLSAEHTLKSANIDIGAAR 305

Query: 308 AAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARKDS 367
           AAF+P ISLT + G++S+ ++GLF  GS +W F P +S+P+FD G NRA L  A+  ++ 
Sbjct: 306 AAFYPSISLTANAGSSSSALAGLFKSGSGAWTFAPSISVPIFDGGSNRATLDSAKVEREI 365

Query: 368 AVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDNHLR 427
            +  Y+  +Q AFREVADALA   TL R  AA++AL D SR++  L+ A Y GG  ++L 
Sbjct: 366 QLQTYQQTLQTAFREVADALAVRSTLDRRIAAQQALTDASRKSFELSDALYRGGSQSYLE 425

Query: 428 YLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
            LDAQR+ Y  +   I      Q   + L++ LGGGW
Sbjct: 426 ALDAQRSLYSAQQDLITLRLTEQSNRITLYKVLGGGW 462