Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 471 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  201 bits (511), Expect = 4e-56
 Identities = 146/463 (31%), Positives = 224/463 (48%), Gaps = 15/463 (3%)

Query: 9   LPIVLALTLAGCSLTPTY--QRPEAPVAAEWGDAAGHTGHSVEQLDWQAFIVDPVLRQLV 66
           LP +L L L+ C++ P Y  Q PEA       DA  +     E + WQ F  DP L QLV
Sbjct: 7   LPSLLVLALSACAVGPDYKTQTPEAANITAAADAKQYDHAKFEGIWWQQF-EDPTLNQLV 65

Query: 67  GTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGN--RQHLPAALSSDGREGV 124
             AL  NR LR     +  ARA       D +P + + AS +  +  +P   +   +   
Sbjct: 66  TQALQGNRDLRVAFARLRAARAIRDDASNDAMPTITSRASSDLAKGQIPGQTT---KRVN 122

Query: 125 SSTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGA 184
           S  Y +GL +  +E+DLFGR++   +A      A E      ++ +IAE+  AY  L GA
Sbjct: 123 SERYDLGLDMA-WELDLFGRIQRNLEATDADQQAAEADLYQLQVTMIAELVDAYGQLRGA 181

Query: 185 ERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEA---LGLVEQSRAELEVTVRQQR 241
           + R+ +    L ++++S  +    R AG    LD + A   L  VE S  +L+    ++R
Sbjct: 182 QLRERIALDNLKNQQESRTITVSLRDAGVGDQLDVERADARLAAVEASVPQLQAEQVRER 241

Query: 242 QAYNALVLLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNA 301
              N +  LLG      ++     + P +   +  G P  L++RRPDIL+AE +L A  A
Sbjct: 242 ---NRIATLLGQRPDKLSVDLGPKNLPAIAKALPIGDPGQLLQRRPDILSAERKLAAATA 298

Query: 302 DIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLA 361
            IG A+A  FPR+SL+G  G  + + S +    + +WA  P ++   FD G  RA L  A
Sbjct: 299 RIGVAKADLFPRVSLSGFLGFTAGRGSQIGSSAANAWALGPSITWAAFDLGSVRARLRGA 358

Query: 362 EARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGG 421
           +A  D A+A YE  + +A  E  +A +     ++   +    +++SR    LA  RY  G
Sbjct: 359 DAEADGALATYEQQVLLALEESENAFSDYGKRQQRLVSLIRQSESSRAAADLAAIRYREG 418

Query: 422 VDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
             + L  LDAQR     E +  +A       +V +++ALGGGW
Sbjct: 419 TVDFLVLLDAQRERLAAEDSQAQAEVDLYRGIVAIYKALGGGW 461