Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 485 a.a., multidrug transporter from Pseudomonas simiae WCS417

 Score =  373 bits (957), Expect = e-108
 Identities = 204/461 (44%), Positives = 290/461 (62%), Gaps = 13/461 (2%)

Query: 12  VLALTLAGCSLTPTYQRPEAPVAAEWGDAAGHTG-----HSVEQLDWQAFIVDPVLRQLV 66
           V A  L+GCSL P YQRPEAPVAA++     ++       +  +  W+ F  DP L+QL+
Sbjct: 10  VTAFVLSGCSLIPDYQRPEAPVAAQFPQGPAYSSAQAPSQAAAEQGWKQFFHDPALQQLI 69

Query: 67  GTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSS 126
            TAL NNR LR   L+I+   AQY+IQRAD  P ++A+ SG+R   PA LS  G   +SS
Sbjct: 70  QTALVNNRDLRVAALNIDAYAAQYQIQRADLFPAVSATGSGSRSRTPARLSQTGESTISS 129

Query: 127 TYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAER 186
            Y  GL +  YE+DLFGRV+SLS+ AL++Y ATEE  R+ +I+L+A V+ AYL     + 
Sbjct: 130 QYSAGLGISSYELDLFGRVRSLSEEALQKYFATEEARRSTQISLVASVANAYLTWQADKE 189

Query: 187 RQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNA 246
              LT+ TL + E S  L  +    G A+ALD  ++   VE +R  L    RQ  Q  N+
Sbjct: 190 LLKLTQDTLDAYEQSFKLTSRSNEVGVASALDLSQSRTSVENARVALARYTRQVAQDENS 249

Query: 247 LVLLLGSAEAAKAMPAERPDEPM---VLNDIVPGAPSALIERRPDILAAEHRLRARNADI 303
           L LLLG+      +PA    +P+   +L+++  G PS L++RRPDI+ AE+ L+A NA+I
Sbjct: 250 LTLLLGTG-----LPANITSKPLSDDLLSEVPAGLPSDLLQRRPDIVQAEYNLKAANANI 304

Query: 304 GAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEA 363
           GAARAAFFP I+LT S GTAS  + GLF GGS +W+F PQ+++P+F+AG  RA L  ++ 
Sbjct: 305 GAARAAFFPSITLTASAGTASPNLGGLFKGGSGTWSFAPQINIPIFNAGSLRASLDYSKI 364

Query: 364 RKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVD 423
           +K+  VA YE AIQ  F+EV+D LAA +T +++  A+R     +++   LA+ RY  GVD
Sbjct: 365 QKEINVANYEKAIQTGFQEVSDGLAARETYKQQLDAQRGFVAANQDYYRLAERRYRIGVD 424

Query: 424 NHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
           ++L +LDAQR  +  + + I     +  + VNL++ALGGGW
Sbjct: 425 SNLTFLDAQRQLFSAQQSLITDRLAQLTSEVNLYKALGGGW 465