Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 494 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  313 bits (802), Expect = 8e-90
 Identities = 188/456 (41%), Positives = 260/456 (57%), Gaps = 5/456 (1%)

Query: 11  IVLALTLAGC-SLTPTYQRPEAPVAAEWGDAAGHTG-HSVEQLDWQAFIVDPVLRQLVGT 68
           +V+   L+GC SL P       PVA+ W       G  +   L W+A+  DP L+ L+ T
Sbjct: 34  LVVLAVLSGCASLAPALDPIALPVASNWRTQPDTPGVAAAADLAWRAYFTDPALQALIET 93

Query: 69  ALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSSTY 128
           AL+NNR LR  LL  E+A A +RIQRA + P +       R  LP  L       V    
Sbjct: 94  ALENNRDLRVALLRTEEASAAFRIQRAQQAPMVGVGVQQIRAGLPDGLQPLAGRSVLEVN 153

Query: 129 QVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERRQ 188
              + +  +E+DL+GRV+S+  AA EQ+LAT +  RA  +ALIA+V+ AYL L   + R 
Sbjct: 154 AASVGISSWELDLWGRVRSMKTAAFEQWLATGQGHRAVELALIAQVADAYLGLRELDERI 213

Query: 189 ALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQR-QAYNAL 247
           AL R+T+ +++    +  +R   G  + L+  +   L+ Q +A L+V +  QR Q  NAL
Sbjct: 214 ALARRTVENQQSLAQIFQKRFELGHGSRLELTQVRTLLSQGKA-LQVQLELQREQQRNAL 272

Query: 248 VLLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIGAAR 307
            LLLGS E     P+   DE +V+ ++V G PS L+  RPDILAAEH LRAR A+IGAAR
Sbjct: 273 ALLLGS-EPQLPPPSAPMDEALVMPELVHGLPSDLLLNRPDILAAEHALRARQANIGAAR 331

Query: 308 AAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARKDS 367
           AAFFPRI+LTG  GT S  +S LF  G+R+W F P + LP+FDAG  +A L ++  R+D 
Sbjct: 332 AAFFPRIALTGGAGTVSTSLSDLFSSGTRAWLFQPTIELPIFDAGMRQANLDVSVVRRDI 391

Query: 368 AVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDNHLR 427
           A+A YE AIQ AFR+V+DALAA   L  + A  R       E L LA+  ++ G   HL 
Sbjct: 392 AIAEYERAIQAAFRDVSDALAARQKLAEQLAVARQAHAAQTERLKLARMLFDAGSAAHLE 451

Query: 428 YLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGG 463
            LDA+R+        ++       + + L+ ALGGG
Sbjct: 452 VLDAERDLLAVAQQLVQVRKAALSSQIGLYAALGGG 487