Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 477 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  345 bits (884), Expect = 2e-99
 Identities = 196/463 (42%), Positives = 271/463 (58%), Gaps = 8/463 (1%)

Query: 9   LPIVLALTLAGC-SLTPTYQRPEAPVAAEWGDAAGHTGHSVEQLDWQAFIVDPVLRQLVG 67
           L  + +  LAGC +L P Y  P +PV      ++G    +   + W++F V+P LR  + 
Sbjct: 13  LSAMASAVLAGCVNLAPEYTAPASPVPQAL-PSSGVEAPTPIDVSWRSFFVEPRLRGTIE 71

Query: 68  TALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSST 127
            AL NNR LR   L+IE+ARAQY I RA   P + A A G+R   P +LS+ G   + S 
Sbjct: 72  LALANNRDLRVAALNIERARAQYGIARASLFPTVEAGAGGSRSRTPGSLSTGGEARIGSQ 131

Query: 128 YQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERR 187
           Y   L L  YE+DLFGRV++L ++AL+ Y  TEE  R+ +I+LIA V+ A+L L   E+R
Sbjct: 132 YSADLGLTSYEIDLFGRVRNLGESALQSYFQTEETRRSTQISLIASVATAWLQLAADEQR 191

Query: 188 QALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNAL 247
             L R TL S+  S  LV +    G  + L   +A   V+ +RA+      Q  Q  NAL
Sbjct: 192 LLLARNTLESQRKSFDLVQRSHRLGAQSGLALAQAQSTVDSARADAAAFDSQVEQDRNAL 251

Query: 248 VLLLGSAEAAKAMPAERPDEPMVLNDIV------PGAPSALIERRPDILAAEHRLRARNA 301
            LL+G+   A  +PA    +     D        P  PS+++ RRPD+ AAEH LRA NA
Sbjct: 252 ALLVGAMPPADLLPAAPASDTAAPADAARLLVPPPDLPSSVLNRRPDVRAAEHALRASNA 311

Query: 302 DIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLA 361
           DIGAARAAFFPRI+LT S GTAS+ +SGLF GGS++W+F P +S+P+FD G NRA L +A
Sbjct: 312 DIGAARAAFFPRIALTASAGTASSTLSGLFAGGSQAWSFAPSISVPIFDGGANRANLRVA 371

Query: 362 EARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGG 421
           EA++   +A YE A+Q AFREVADALA   TL     A+R+L   +  +  L+++ +  G
Sbjct: 372 EAQQKIQIATYEKAVQTAFREVADALAERRTLAERLDAQRSLLGATSRSFELSQSLFRSG 431

Query: 422 VDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
             ++L  LDAQR  Y  + A I      Q   + +++ LGGGW
Sbjct: 432 ASSYLDVLDAQRAYYAAQQALIGLQLTEQTNRLTIYKTLGGGW 474