Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 475 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Variovorax sp. SCN45

 Score =  354 bits (908), Expect = e-102
 Identities = 206/470 (43%), Positives = 286/470 (60%), Gaps = 6/470 (1%)

Query: 4   MVNRVLPIVLA--LTLAGCSLTPTYQRPEAPVAAEW-GDAAGHTGHSVEQLDWQAFIVDP 60
           M  +++P  LA  + LAGCSL PTY+RP APV   + GD A   G +   L WQ F  DP
Sbjct: 1   MTKKLIPTALAAAMLLAGCSLIPTYERPAAPVPTTFPGDPAQPAGQAAANLAWQDFFTDP 60

Query: 61  VLRQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHL-PAALSSD 119
            L  L+ TAL NNR LR ++L+IEQARAQ++IQR+   P L  + +G+R    P      
Sbjct: 61  RLAGLIQTALANNRDLRVSVLNIEQARAQFQIQRSALFPALGVTGTGSRSGPNPYQGIEP 120

Query: 120 GREGVSSTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYL 179
           G   V+S Y V      +E+D FGR+++L D AL QYLAT+E  +A +I+LIA V+  +L
Sbjct: 121 GMGSVASQYSVNFGFTAWELDFFGRIRALKDQALAQYLATDETRKAVQISLIASVANGWL 180

Query: 180 ALDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQ 239
            L   +    +TRQT+ +RE+S+ L   R   G ++ LD+Q A G  E +RA     +R 
Sbjct: 181 TLLADDELLEITRQTMVTREESVRLTKLRFDNGVSSELDYQAANGQFESARAAYAQQLRA 240

Query: 240 QRQAYNALVLLLGSAEAAKAMP--AERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLR 297
           + +  NAL LLLG+   A+A    A+  +    + D+  G PS L+  RPDI +AE +L 
Sbjct: 241 RAEDENALALLLGAPVPAEATAGGAKGLNGIKPMPDVPAGLPSDLLAERPDIRSAEQQLI 300

Query: 298 ARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAG 357
           A NA+IGAARA FFPR+SLT S GTAS + SGLFD GS++W+F P ++LP+F+AG NRA 
Sbjct: 301 AANANIGAARANFFPRVSLTSSIGTASTEFSGLFDRGSKAWSFAPTVTLPIFNAGSNRAT 360

Query: 358 LSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKAR 417
           L  A+A ++ AVA YE +IQ AFREVADALA   TL  +  A RA AD+      L+  R
Sbjct: 361 LESAKAGREIAVAQYEKSIQTAFREVADALAGRATLGEQVRALRAQADSEAVRFKLSDLR 420

Query: 418 YEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGWPSK 467
           Y  G+ + L  LDAQR+ +  + + +     +    V L++ LGGGW ++
Sbjct: 421 YRNGIASALDLLDAQRSLFAAQQSAVTTQLLQLQNQVTLYKTLGGGWATR 470