Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 472 a.a., Efflux transport system, outer membrane factor (OMF) lipoprotein from Sphingobium sp. HT1-2

 Score =  307 bits (787), Expect = 4e-88
 Identities = 178/458 (38%), Positives = 267/458 (58%), Gaps = 7/458 (1%)

Query: 13  LALTLAGCSLTPTYQRPEAPV--AAEWGDA---AGHTGHSVEQLD--WQAFIVDPVLRQL 65
           LALTLA C + P Y RPE PV  A+  G A   A   G ++   D  W+ F  DP L ++
Sbjct: 13  LALTLAACDMAPKYARPELPVPQASPQGPAYAAAVEGGAAIVPADTAWRDFFTDPRLVRV 72

Query: 66  VGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVS 125
           + T+L NNR LR  + ++EQARAQY++QRAD +P + A+ +      P       +   +
Sbjct: 73  IETSLANNRDLRIAVANVEQARAQYKVQRADLLPTVGATGTATYSEQPLVQFGQSQRLNT 132

Query: 126 STYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAE 185
             YQ  + +  +E+DLFGRV++L+ AA EQY A+ E   AA+ AL+AEV+ A++ +   +
Sbjct: 133 DVYQAQVGISAWEIDLFGRVRNLTKAAQEQYFASVENRNAAQTALVAEVATAWVNMAADQ 192

Query: 186 RRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYN 245
              ++ R    + +++L L   R   G A+ L+ +EA    +Q+RA +        Q  N
Sbjct: 193 ELLSIARTLATAFKETLDLNKARFDKGIASELEVREAQTSYDQARAAIASATTLVAQDQN 252

Query: 246 ALVLLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIGA 305
           AL LL G+   ++ +P+  P+  + L+++    PS L+ RRPDI +AEH+L A NA+IGA
Sbjct: 253 ALNLLAGTTLGSEDLPSALPEGHVTLDNLPAELPSTLLLRRPDIASAEHQLIAANANIGA 312

Query: 306 ARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARK 365
           ARAAFFP++SLT + GT S  +SGLF  GS +W+  P  +LP+FD GRN+  L  A A  
Sbjct: 313 ARAAFFPQLSLTAALGTVSLGLSGLFKSGSDTWSVAPSATLPIFDFGRNKGNLRYARATY 372

Query: 366 DSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDNH 425
           D+ +A YE ++Q  FREVADALA   T+  +  A+ +  D +R+   L +AR+  GVD  
Sbjct: 373 DAMLATYEKSVQTGFREVADALARRGTMTDQVEAQTSQRDAARKAYDLTQARFRAGVDGF 432

Query: 426 LRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGG 463
           L  L +QR     E + +     R   ++ L+RA+GGG
Sbjct: 433 LPTLVSQRTLSSAEQSLVSTRLARLTNMIELYRAMGGG 470