Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 496 a.a., RND efflux transporter, outer membrane protein from Pseudomonas putida KT2440

 Score =  201 bits (511), Expect = 5e-56
 Identities = 151/466 (32%), Positives = 233/466 (50%), Gaps = 24/466 (5%)

Query: 17  LAGCSLTPTYQRPEA-PVAAEWGDAAGHTGHS----VEQLDWQAFIVDPVLRQLVGTALD 71
           L+ C+L+P Y RPE    AA++  A G T  S    + +  W     D  L  LV     
Sbjct: 33  LSACTLSPDYHRPELNSTAAQFKHAEGWTQASPSDAIARGAWWEIYGDAGLNALVEELNR 92

Query: 72  NNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSS----DGREGVSST 127
           +N+++ Q+     QA+A  R  RA   P L+ S S NR       SS    +   G+ +T
Sbjct: 93  SNQTVAQSEAQYRQAQALVRSSRAALFPSLDLSTSKNRSAQGTGSSSSSLSNNSSGIRNT 152

Query: 128 YQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERR 187
           Y   L +  +E+DL+G+++   +A      A+     + R++  +E+ Q YL L   + +
Sbjct: 153 YNAQLGV-SWEIDLWGKLRETLNANEASAEASFADLASIRLSQQSELVQNYLQLRVIDEQ 211

Query: 188 QALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNAL 247
           + L   T+A+ E SL +   +  AG A      +A   ++ ++A+L   + Q+ Q  NA+
Sbjct: 212 KRLLEATVAAYERSLRMNENQYRAGVAGPDAVAQARTQLKSTQADLIDLIWQRAQFENAI 271

Query: 248 VLLLGSAEA------AKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNA 301
            +LLG A A      +KA+PA        L  I    PS L+ERRPDI AAE  + A NA
Sbjct: 272 AVLLGKAPADFALADSKAIPA--------LPQIPVSLPSQLLERRPDIAAAERNVMAANA 323

Query: 302 DIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLA 361
           +IG +RAA+FP +SL+ S G +S+  S   +  +R W+  PQL+L LFDAG+  A +   
Sbjct: 324 NIGVSRAAYFPDLSLSMSGGYSSSSFSNWIELPNRYWSVGPQLALTLFDAGKRSAEVDRT 383

Query: 362 EARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGG 421
            A  D  VA Y   +   FREV + L        E   R+   D +RE+L L + +Y  G
Sbjct: 384 VAVYDQTVAQYRQTVLDGFREVENLLVQLKVYGDEAVVRQEALDAARESLRLTENQYRAG 443

Query: 422 VDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGWPSK 467
           +  +L  ++ Q  +  NE + +     R +A V L  ALGGGW ++
Sbjct: 444 LIGYLDVVNVQTTALSNERSVLNLLQGRLVASVQLVAALGGGWDAE 489