Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 484 a.a., Probable efflux pump outer membrane protein TtgC from Pseudomonas putida KT2440

 Score =  359 bits (922), Expect = e-103
 Identities = 199/459 (43%), Positives = 281/459 (61%), Gaps = 8/459 (1%)

Query: 12  VLALTLAGCSLTPTYQRPEAPVAAEWGDAAGHTGH-----SVEQLDWQAFIVDPVLRQLV 66
           V A  L GCSL P YQ PEAPVAA+W     ++       +  +  W+ F  DP L+QL+
Sbjct: 10  VTAFILGGCSLIPDYQTPEAPVAAQWPQGPAYSPTQSADVAAAEQGWRQFFHDPALQQLI 69

Query: 67  GTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSS 126
            T+L NNR LR   L+++  RAQYRIQRAD  P ++A+ SG+RQ +PA +S  G  G++S
Sbjct: 70  QTSLVNNRDLRVAALNLDAYRAQYRIQRADLFPAVSATGSGSRQRVPANMSQTGESGITS 129

Query: 127 TYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAER 186
            Y   L +  YE+DLFGRV+SL++ ALE YL++E+  R+ +IAL+A V+ AY      + 
Sbjct: 130 QYSATLGVSAYELDLFGRVRSLTEQALETYLSSEQARRSTQIALVASVANAYYTWQADQA 189

Query: 187 RQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNA 246
              LT +TL + E+S  L  +    G A+ALD  +A   VE +R +     R   Q  N+
Sbjct: 190 LFKLTEETLKTYEESYNLTRRSNEVGVASALDVSQARTAVEGARVKYSQYQRLVAQDVNS 249

Query: 247 LVLLLGSAEAAK-AMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARNADIGA 305
           L +LLG+   A  A P E   + +   ++  G PS +++RRPDI  AEH L+A NA+IGA
Sbjct: 250 LTVLLGTGIPADLAKPLELDADQLA--EVPAGLPSDILQRRPDIQEAEHLLKAANANIGA 307

Query: 306 ARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSLAEARK 365
           ARAAFFP ISLT + G+ S  M  LF GG  +W F PQ++LP+F+AG  +A L  ++ +K
Sbjct: 308 ARAAFFPSISLTANAGSLSPDMGHLFSGGQGTWLFQPQINLPIFNAGSLKASLDYSKIQK 367

Query: 366 DSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEGGVDNH 425
           D  VA YE  IQ AF+EV+D LAA  T   +  A+R L   +++   LA+ RY  G+D++
Sbjct: 368 DINVAKYEKTIQTAFQEVSDGLAARKTFEEQLQAQRDLVQANQDYYRLAERRYRIGIDSN 427

Query: 426 LRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
           L +LDAQRN +  + A I     +  + VNL++ALGGGW
Sbjct: 428 LTFLDAQRNLFSAQQALIGDRLSQLTSEVNLYKALGGGW 466