Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 490 a.a., efflux transporter outer membrane subunit from Paraburkholderia sabiae LMG 24235

 Score =  243 bits (620), Expect = 1e-68
 Identities = 157/473 (33%), Positives = 251/473 (53%), Gaps = 26/473 (5%)

Query: 5   VNRVLPI--VLALTLAGCSLTPTYQRPEAPVAAEWGDAAGHTGHSVEQLDWQAFIVDPVL 62
           + RVL I  + ALTL+GC L P Y RP+  V A +     +    V   +W     DPVL
Sbjct: 1   MRRVLLIGPLCALTLSGCLLGPNYSRPQVEVPATYRFPDNYAS-DVANTEWWKQFDDPVL 59

Query: 63  RQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAA--LSSDG 120
             L+ TAL NN  ++     ++Q   Q+   RA  +P ++A     RQ +P    L S+ 
Sbjct: 60  NDLITTALANNNDVKVAAARVDQFLGQFVTTRAALLPHVDAGFDAERQRIPTTSPLFSNI 119

Query: 121 REGVSSTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLA 180
              V ++YQ+ LS   +E+DLFG  + L++AA    L+TEE  R   + L++ V+ +Y+ 
Sbjct: 120 TSPVFNSYQLALSA-SWEIDLFGHNRRLTEAARASLLSTEEAKRGTILTLVSSVASSYIN 178

Query: 181 LDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRA---ELEVTV 237
           L   +R+  + + T +SR +S+ +   R   G  + ++  ++    E SR+   ++E  +
Sbjct: 179 LRSLDRQLEIAKATTSSRAESVHVFELRFKGGEVSQMELAQSQSEYEDSRSRIPQIESQI 238

Query: 238 RQQRQAYNALV------LLLGSAEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILA 291
            QQ  A + L+      +L G A    A PA           +  G PS L+ERRPD+  
Sbjct: 239 AQQEDALSVLLGRNPGDILRGRALGELAAPA-----------VPAGLPSDLLERRPDLRQ 287

Query: 292 AEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDA 351
           AE  L + NA IGAA+A +FP+IS+TG  GT S Q S LF G +R W+F   ++ P+F+ 
Sbjct: 288 AEQDLVSANAQIGAAKALYFPQISITGLLGTQSGQFSKLFTGPARVWSFAGSVTQPIFEG 347

Query: 352 GRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETL 411
           G     +  AEA +  A+ +Y  AIQVAF+EV DAL ++  LR +   +    +      
Sbjct: 348 GAIAGQVKQAEAVQQQALYSYRKAIQVAFQEVDDALISSQKLREQFDIQGRQVEALATYA 407

Query: 412 TLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
            +A+ RYEGG  +++  LDA+R+ +  + +  +      ++ V+L++A+GGGW
Sbjct: 408 HMARLRYEGGYTSYIEVLDAERSLFNAQLSQTQTQAGVLVSYVSLYKAMGGGW 460