Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 482 a.a., RND efflux system, outer membrane lipoprotein CmeC from Hydrogenophaga sp. GW460-11-11-14-LB1

 Score =  288 bits (738), Expect = 2e-82
 Identities = 181/462 (39%), Positives = 261/462 (56%), Gaps = 22/462 (4%)

Query: 17  LAGCSLTPTYQRP-EAPVAAEWG------DAAGHTGHSVEQLDWQAFIVDPVLRQLVGTA 69
           LAGC+  P  +   +  VA   G      DA      + ++L W   +  P LRQ +  A
Sbjct: 21  LAGCAQVPPAKPDVQGVVAPTLGQPLAVLDAGADAVQTSQRLAW---VQHPGLRQSIAQA 77

Query: 70  LDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHLPAALSSDGREGVSSTYQ 129
           L +NR LR  L +IE+ARAQY I  A ++P + A+A G+R    A LSS+G    S+ Y 
Sbjct: 78  LTHNRDLRVALSNIERARAQYGITSAAQLPTVAATAQGSRSRTAAGLSSNGVSTTSTQYT 137

Query: 130 VGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIAEVSQAYLALDGAERRQA 189
             L++  +E+D +GRV++L++AAL+Q+L +EE  R  RI L+A+V+ A+L L   E R  
Sbjct: 138 AQLAITSFELDFWGRVRNLNEAALQQFLQSEENQRNVRITLVADVTNAWLNLAADEARLT 197

Query: 190 LTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAELEVTVRQQRQAYNALVL 249
           L R TLA RE +  L  +    G  + L   +    VE +R ++     Q  +  NAL  
Sbjct: 198 LARDTLAGREKAYQLTERIHQLGGTSGLVLAQNRVTVETARGDVAAFTAQVAKDRNALEA 257

Query: 250 LLGS---------AEAAKAMPAERPDEPMVLNDIVPGAPSALIERRPDILAAEHRLRARN 300
           L+GS         AE  +A PA  P   MVL   +P   S+L+  RPD+ A+E+ L+A +
Sbjct: 258 LVGSGLRREWLPTAETLRAAPAAAPAALMVLPAELP---SSLLLERPDVRASEYNLQALS 314

Query: 301 ADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLPLFDAGRNRAGLSL 360
           A++ AARAA FP ISL+ S GT S ++  LF  G+ +W+F+PQ+  P+FD G  RA + +
Sbjct: 315 ANVAAARAALFPTISLSTSIGTGSRELDNLFGSGNNTWSFVPQIRWPIFDGGAARASVDV 374

Query: 361 AEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTSRETLTLAKARYEG 420
           A+A +D AVA YE AIQ AFRE +DALA         AA++A+ D +     L++AR+  
Sbjct: 375 AQANRDIAVAQYEKAIQTAFREASDALAERAQWEARLAAQQAVVDANARAFELSEARFTS 434

Query: 421 GVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGG 462
           GVDN+L  LDAQR+ Y  + A I      Q   V L++ LGG
Sbjct: 435 GVDNYLTVLDAQRSLYAAQQALIALRQSEQANRVALWKVLGG 476