Pairwise Alignments

Query, 468 a.a., Outer membrane protein OprJ from Pseudomonas putida KT2440

Subject, 461 a.a., efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family from Enterobacter asburiae PDN3

 Score =  307 bits (787), Expect = 4e-88
 Identities = 187/477 (39%), Positives = 274/477 (57%), Gaps = 32/477 (6%)

Query: 2   MIMVNRVLPIVLALTLAGC-SLTPTYQRPEAPVAAEWG--------DAAGHTGHSVEQLD 52
           M ++ R L I     LAGC SL P YQRPEAPV  ++          AAG+     +   
Sbjct: 1   MFLLKR-LSISTVFILAGCVSLAPEYQRPEAPVPRQFSLSRNGLTPAAAGY-----QDTG 54

Query: 53  WQAFIVDPVLRQLVGTALDNNRSLRQTLLDIEQARAQYRIQRADRVPGLNASASGNRQHL 112
           W+ F VDP +  L+  AL NNR ++   L +E+ARAQ+ +  ADR P LNAS+       
Sbjct: 55  WRNFFVDPQVAGLITEALKNNRDIKMAALKVEEARAQFNVTDADRYPQLNASSGITYS-- 112

Query: 113 PAALSSDGREGVSSTYQVGLSLPEYEVDLFGRVKSLSDAALEQYLATEEVGRAARIALIA 172
              L SD  +  +  Y  GL+L  YE+D FG++K++SDA  + Y A+EE  RA  I L++
Sbjct: 113 -GGLKSD--KPTAQQYDAGLAL-SYELDFFGKLKNMSDADRQNYFASEEARRAVHIMLVS 168

Query: 173 EVSQAYLALDGAERRQALTRQTLASREDSLALVGQRRAAGTATALDHQEALGLVEQSRAE 232
            VSQ+Y     A ++  + R TL +   S A V Q+   G+   L  ++A G +E +RA+
Sbjct: 169 NVSQSYFNQQLAYKQLRIARDTLNNYRQSYAFVEQQLVTGSTNVLALEQARGQIESTRAD 228

Query: 233 LEVTVRQQRQAYNALVLLLGSAEAAKAMPAERPDEPMVLNDIVP-----GAPSALIERRP 287
           +     +  QA NAL L+LG+  A         D  M  +D+ P        SA++ +RP
Sbjct: 229 IAKREGELAQANNALQLVLGTYSALPG------DGGMNASDVAPVKLPPHLSSAILLQRP 282

Query: 288 DILAAEHRLRARNADIGAARAAFFPRISLTGSFGTASAQMSGLFDGGSRSWAFMPQLSLP 347
           DI+ AE++L+A +A+IGAARAAFFP ISLT    T S ++S LF  GS  W F+P++ +P
Sbjct: 283 DIMEAEYQLKAADANIGAARAAFFPSISLTSGLSTGSTELSSLFTSGSGMWNFIPKIEIP 342

Query: 348 LFDAGRNRAGLSLAEARKDSAVAAYEGAIQVAFREVADALAATDTLRREQAARRALADTS 407
           +F+AGRN+A L LAE R+  +V  YE  IQ AF++VADALA  D++ ++ AA++   D+ 
Sbjct: 343 IFNAGRNKANLKLAEIRQQQSVVNYEQKIQSAFKQVADALALRDSINQQLAAQQRYLDSL 402

Query: 408 RETLTLAKARYEGGVDNHLRYLDAQRNSYVNEAAFIEASTQRQLALVNLFRALGGGW 464
           R T   A+  Y  G  +++  LDA+R+ +  +   ++    RQ+  +NLF ALGGGW
Sbjct: 403 RITQQRARGLYSSGAVSYIEVLDAERSLFSTQQNILDLIYARQVNEINLFTALGGGW 459