Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 380 a.a., RND transporter from Pseudomonas simiae WCS417

 Score =  298 bits (762), Expect = 2e-85
 Identities = 175/361 (48%), Positives = 233/361 (64%), Gaps = 8/361 (2%)

Query: 13  LAMAIALAGC-EPAAEQDGAANASYPVEIVTLAPEQVALAAELPGRVEPMRVAEVRARVP 71
           LA+ +AL+ C + AAE      A   VE  TL  + +A+ +EL GR+   R+AEVRARV 
Sbjct: 12  LALTLALSACGDSAAEAPEMPLAKVRVE--TLEAKPLAITSELSGRIAAPRIAEVRARVA 69

Query: 72  GIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPLV 131
           G+V+ + F+EG DVK GDVLF+IDPAPFKA L  A+A+L++A+A   +A+ + +RY  LV
Sbjct: 70  GVVMQRVFKEGHDVKQGDVLFRIDPAPFKADLDSAQANLSKAEADAFKARLQEQRYSQLV 129

Query: 132 KIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEGA 191
           +  A+S QD+D+A A +R   A V + +A V+ ARLNLGYATVTAPISGRIGRAL TEGA
Sbjct: 130 EGNAISGQDYDNARAAVRQTNAEVAANKAAVERARLNLGYATVTAPISGRIGRALVTEGA 189

Query: 192 LVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGAL---SADSQRLT-AQVEGT 247
           LVGQ EAT +A IQQLDPI+ D TQS  +   LR+A + G+L     D  + T  + +G+
Sbjct: 190 LVGQNEATPLALIQQLDPIHADLTQSTRELNDLRRAFRAGSLKQVGQDQAKATLIEDDGS 249

Query: 248 DFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRA 307
            +   G+L+F ++SVD GTGQ+ILR  F N D  LLPG +VRVR  Q  D   I VPQRA
Sbjct: 250 LYPLPGKLLFAEISVDPGTGQIILRSEFPNPDLDLLPGSFVRVRLEQAVDKQGISVPQRA 309

Query: 308 VQRGSDGQARVLVATNG-IAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPGMP 366
           + R S G   VL+   G     + V  G +   RW ++ GL+PGD++IV       PG  
Sbjct: 310 ITRDSAGIPMVLLLDAGQTVSQQPVELGAVINDRWIVSSGLKPGDRIIVEGLQHARPGEK 369

Query: 367 V 367
           V
Sbjct: 370 V 370