Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 384 a.a., antibiotic transporter from Pseudomonas simiae WCS417

 Score =  249 bits (637), Expect = 7e-71
 Identities = 157/383 (40%), Positives = 226/383 (59%), Gaps = 33/383 (8%)

Query: 10  VGALAMAIALAGCEPAAEQDGAANASYP-VEIVTLAPEQVALAAELPGRVEPMRVAEVRA 68
           V A+A+A  L+GC+   +++ A  A  P V +VT+ P+   L +ELPGR    R+AEVR 
Sbjct: 11  VTAVALASLLSGCK---KEEAAPPAQIPQVGVVTIQPQAFTLTSELPGRTTAYRIAEVRP 67

Query: 69  RVPGIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYE 128
           +V GI+L + F+EG DVK G  L+QIDP+ ++A L  A+A L +++++         RY+
Sbjct: 68  QVNGIILKRLFKEGGDVKEGQQLYQIDPSVYEATLKSAQASLTQSKSISD-------RYK 120

Query: 129 PLVKIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALAT 188
            LV  +AVS+Q++D+A A   ++       +A+VQ A++N+ Y  V APISGRIGR+  T
Sbjct: 121 QLVDEQAVSRQEYDTAVANRMTS-------EANVQTAQINVRYTKVFAPISGRIGRSSVT 173

Query: 189 EGALVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGAL-----SADSQRLTAQ 243
           EGALV  G+A  MA IQQLDPIY+D TQS+A+ L+LR+ L  G L     +A   +LT +
Sbjct: 174 EGALVSNGQADAMAVIQQLDPIYVDVTQSSAEMLKLRRDLASGQLEKAGDNAAKVKLTLE 233

Query: 244 VEGTDFQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILV 303
            +G+ +   G+L F++VSVD+ TG V LR  F N D TLLPGM+V  +   G ++ AIL 
Sbjct: 234 -DGSAYGVDGKLEFSEVSVDQTTGSVTLRAVFPNPDHTLLPGMFVHAQLQAGVNSKAILA 292

Query: 304 PQRAVQRGSDGQARVLVA-TNGIAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLA 362
           PQ+ V R   G    LV   +   E R +      G+ W + +GL  GD+VI      + 
Sbjct: 293 PQQGVTRDLKGTPTALVVNADNKVEQRELVANRTYGAYWLVEKGLNAGDRVITEGLQYVK 352

Query: 363 PGMPV--------APAQKQTAAA 377
           PG  V         PA   +AAA
Sbjct: 353 PGAEVKVKAADNAKPADAGSAAA 375