Pairwise Alignments

Query, 378 a.a., Multidrug efflux RND membrane fusion protein MexC from Pseudomonas putida KT2440

Subject, 397 a.a., efflux RND transporter periplasmic adaptor subunit from Dickeya dianthicola ME23

 Score =  288 bits (737), Expect = 2e-82
 Identities = 159/371 (42%), Positives = 223/371 (60%), Gaps = 5/371 (1%)

Query: 13  LAMAIALAGCEPAAEQDGAANASYP-VEIVTLAPEQVALAAELPGRVEPMRVAEVRARVP 71
           L+  + L GC+  A Q GA     P V I+T+  + + +  ELPGR    R+AEVR +V 
Sbjct: 16  LSGGLVLTGCDNKASQGGAQQGGAPEVGIITIKSQTLNIITELPGRTSAYRIAEVRPQVN 75

Query: 72  GIVLHKRFEEGADVKAGDVLFQIDPAPFKAALARAEADLARAQAVQQEAQARVKRYEPLV 131
           GI+L + F EG+DVKAG  L+QIDPA ++A    A+A L +AQA  + AQ  V RY+PL+
Sbjct: 76  GIILKRNFVEGSDVKAGTSLYQIDPATYQAQYNNAKAALVQAQANAEIAQLTVNRYKPLL 135

Query: 132 KIEAVSQQDFDSATAELRSAGAAVRSAQADVQAARLNLGYATVTAPISGRIGRALATEGA 191
               VS+QD+D A A  R   AAV +A+A +  A+++L Y  VTAPI+GR+G++  TEGA
Sbjct: 136 GTNYVSKQDYDQAVATARQTEAAVAAAKASLDNAQISLNYTRVTAPITGRVGKSTVTEGA 195

Query: 192 LVGQGEATLMARIQQLDPIYIDFTQSAADALRLRQALKDGALSADSQRLTAQV---EGTD 248
           LV   +AT M  IQQLDPIY+D TQS  D LRL++ L+ G L   + +   Q+    GT 
Sbjct: 196 LVSNAQATAMTTIQQLDPIYVDVTQSTNDFLRLKKELESGTLQQTNGKANVQLTLDSGTR 255

Query: 249 FQRSGELMFTDVSVDRGTGQVILRGRFDNADGTLLPGMYVRVRTPQGTDNHAILVPQRAV 308
           + ++G L F+DV+VD  TG + LR  F N D  LLPGM+VR +   G   +AILVPQ+ V
Sbjct: 256 YSQAGTLEFSDVTVDETTGSITLRAVFPNPDHNLLPGMFVRAQLDSGVTPNAILVPQQGV 315

Query: 309 QRGSDGQARVLVATNG-IAEARAVRTGVMQGSRWQITEGLEPGDQVIVGSPAGLAPGMPV 367
            R   G A V++   G   E  ++ TG   G +W +T G++ GD++I+     + PGM V
Sbjct: 316 SRTPRGDATVMLVGEGDKVEVHSITTGQAIGDKWLVTSGVKSGDRIILTGLQKIRPGMQV 375

Query: 368 APAQKQTAAAQ 378
              +     AQ
Sbjct: 376 KAQEAAAGNAQ 386