Pairwise Alignments

Query, 804 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score = 56.6 bits (135), Expect = 7e-12
 Identities = 54/210 (25%), Positives = 90/210 (42%), Gaps = 13/210 (6%)

Query: 588 KATTINRVVDAAKAFRSDYPQ------PGLSIRLASGNAGVLAAINEEVEKSETPMLLYV 641
           KAT     +D  K  R   P+        L++ +A      + A  +EV K+    +L V
Sbjct: 285 KATPAANPLDVIKEVRRIMPELESQLPSALNVSIAYDATRFIQASIDEVIKTLGEAVLIV 344

Query: 642 YAAIALLVFAVYRDLRAVLVCCLPLTIGTFIGYWFMKELQIGLTIATLPVMVLAVGIGVD 701
              + L + A    LR+VL+  + + +      +FM+ +   L + TL  MVLA+G+ VD
Sbjct: 345 IVVVFLFLGA----LRSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVVD 400

Query: 702 YAFYIYNRLQLHLAHGQSITKAVEHALLEVGVATIFTAITLAVGVATWAFSELKFQA--- 758
            A  +   +  H+  G+S   A      E+ +  +   ITLA   A   F      A   
Sbjct: 401 DAIVVVENIHRHMEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTGALFK 460

Query: 759 DMGKLLAFMFIVNMVMAMTVLPAFAVWLER 788
           +    LA   I++ ++A+T+ P     L R
Sbjct: 461 EFALTLAGAVIISGIVALTLSPMMCALLLR 490



 Score = 46.6 bits (109), Expect = 7e-09
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 7/151 (4%)

Query: 247 ALLLTAGAVYWYCHSLRFTLLALVCSLASLVWQFGSLRLLGYGLDPLAVLVPFLVFAIGV 306
           A+L+    V+ +  +LR  L+ +V    S++     ++++GY L+ L +L   L   + V
Sbjct: 340 AVLIVIVVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIGLVV 399

Query: 307 SHGVQQINFIVREIAIGKSAEEAARSSFTGLLIPG-----TLALVTALVSFVTLLLIPIP 361
              +  +  I R +  GKS  +AA      + +P      TLA V A + F+T L     
Sbjct: 400 DDAIVVVENIHRHMEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGL--TGA 457

Query: 362 MVREVAITASLGVAYKIITNLLMLPLLASML 392
           + +E A+T +  V    I  L + P++ ++L
Sbjct: 458 LFKEFALTLAGAVIISGIVALTLSPMMCALL 488