Pairwise Alignments

Query, 443 a.a., Amino acid permease family protein from Pseudomonas putida KT2440

Subject, 464 a.a., putative amino acid permease YhdG from Methylophilus sp. DMC18

 Score =  112 bits (281), Expect = 2e-29
 Identities = 116/454 (25%), Positives = 204/454 (44%), Gaps = 43/454 (9%)

Query: 3   QSTSGASLRRSLGPFSVLLFGLAFLAPLIVFGTYGVITQA-SGNTTAMAYLVAATGVVFT 61
           Q  +   L++ L  F + L G+       +F   G+     SG    +++++AA    F 
Sbjct: 12  QPHAHTGLKKCLTAFDLALLGIGGAIGTGIFVLTGIAAATQSGPAVVLSFIIAAIAAGFA 71

Query: 62  ALSYGRLVRVFPVAGSAYTYTRKMLNANLGFMVGWAALLDY-------------FFIPML 108
           ALSY  L      +GSAY Y+         +M+GW  LL+Y             +F+  L
Sbjct: 72  ALSYAELSSSVGGSGSAYGYSYVAFGEFAAWMMGWMLLLEYGVGAAAVANGWAGYFVNTL 131

Query: 109 --IWLLGASYLNMAFPEVPQWVWITGFIV--STSLLNVLGIQVANRFNVLLMVVQLVIIA 164
             + L   ++L  A P +   + +  F +    +LL ++G++ + R N L+++++L  IA
Sbjct: 132 SNLGLHLPAHLTKA-PVLGGTINLPAFAIIWVLTLLLMVGVKESARANNLMVIIKLSTIA 190

Query: 165 VFIGLCVHYIVAANGPGGLLSAKPF-FNQDVPFATS---MAGAAIAAYSFLGFDALSTLS 220
           +F+ L V +I   N     L   PF + + +    +   +AGA++  +++ GFDA+ST +
Sbjct: 191 IFLALSVGHIHTEN----WLPFMPFGWFETLDNGKNIGVLAGASLVFFAYFGFDAVSTAA 246

Query: 221 EETRDPGRTLPRAILLVALIGGSVYVGSSYFMYLAHPSPTFELVDGAAFEIARMIGGDLF 280
           EE + P R LP  ++        +Y+  S  +    P          A+ + + +G    
Sbjct: 247 EECKLPQRDLPIGLIASLSFCTIIYIIVSGTLTGVIPYHELNTSSPVAYALTK-LGYTWS 305

Query: 281 FAVVLTGIIVAHFAAGMSFQASVGRLLYALGRDNQLPRRLFGALHPRYKTPAFNILLCG- 339
             +V TG++       +     + R+L+A+ RD  L   +F A++P  +TP+  ILLCG 
Sbjct: 306 STLVATGVLAGLITVLLVLLYGLTRILFAMSRDG-LISPVFSAVNPDRQTPSKIILLCGT 364

Query: 340 -VFGTAGFGLTIATATSLVNFGAFLAFTAVNLCALRLTFDARVKDGAGLLR------GVL 392
            V   AGF + +      VN G   +F  V +  +RL      +    L R        L
Sbjct: 365 VVSIVAGF-IPLGELAETVNIGTLASFIMVCIGVIRLR-----QTHPDLPRPFKNPFNPL 418

Query: 393 FPLIGLVTAGWMLVSLDKDALIMGGCWLGLGLVY 426
            PL G++T G ++  L        G W  +G+V+
Sbjct: 419 IPLGGVITCGALMSFLPASTWHRFGLWAVVGVVF 452