Pairwise Alignments

Query, 548 a.a., AMP-binding domain protein from Pseudomonas putida KT2440

Subject, 560 a.a., Medium-chain-fatty-acid CoA ligase from Pseudomonas putida KT2440

 Score =  251 bits (641), Expect = 5e-71
 Identities = 179/542 (33%), Positives = 269/542 (49%), Gaps = 26/542 (4%)

Query: 19  PLSPLSFLKRAAQVYPQRDAVIYGARRYSYRQLHERSRALASALERVGVQPGERVAILAP 78
           PL     L   ++    R+ V     R +Y QL+ER   LA+ L   GV+ G+ VA++  
Sbjct: 17  PLLIKRLLMSGSRYEKTREIVYRDQMRLTYPQLNERIARLANVLTEAGVKAGDTVAVMDW 76

Query: 79  NIPEMLEAHYGVPGAGAVLVCINIRLEGRSIAFILRHCAAKVLICDREF----GAVANQA 134
           +    LE  + +P  GAV+  IN+RL    I + + H   +V++ + +F     A+A Q 
Sbjct: 77  DSHRYLECMFAIPMIGAVVHTINVRLSPEQILYTMNHAEDRVVLVNSDFVGLYQAIAGQ- 135

Query: 135 LAMLDAPPLLVGIDDDQAERADLAHDLDYEAFLAQGDPARPLSAPQNEWQSIAIN-YTSG 193
           L  +D   LL    D  AE   L  +  YE  LA   P      P  +  S+A   YT+G
Sbjct: 136 LTTVDKTLLLTDGPDKTAELPGLVGE--YEQLLAAASPRYDF--PDFDENSVATTFYTTG 191

Query: 194 TTGDPKGVVLHHRGAYLNACAGALIFQ-------LGPRSVYLWTLPMFHCNGWSHTWAVT 246
           TTG+PKGV   HR   L+  A A +         LG   VY+   PMFH + W   +A T
Sbjct: 192 TTGNPKGVYFSHRQLVLHTLAEASVTGSIDSVRLLGSNDVYMPITPMFHVHAWGIPYAAT 251

Query: 247 LSGGTHVCLRKVQPDAINAAIAEHAVTHLSAAPVVMSMLIHAEHASAPPVPV-SVITGGA 305
           + G   V   + +PD +     E  VT     P ++ ML++  +A         +I GG+
Sbjct: 252 MLGMKQVYPGRYEPDMLVKLWREEKVTFSHCVPTILQMLLNCPNAQGQDFGGWKIIIGGS 311

Query: 306 APPSAVIAAMEARGFNITHAYGMTESYGPSTLCLWQPGVDELPLEARAQFMSRQGVAHPL 365
           +   ++  A  ARG  +T AYGM+E+    +       +     + R  +  + GV  PL
Sbjct: 312 SLNRSLYQAALARGIQLTAAYGMSETCPLISAAHLNDELQAGSEDERVTYRIKAGVPVPL 371

Query: 366 LEEATVLDTDTGRPVPADGLTLGELVVRGNTVMKGYLHNPEATRAALANGWLHTGDLAVL 425
           +E A V     G  +PADG T GELV+R   +  GY   PE +      GWLHTGD+A L
Sbjct: 372 VEAAIV--DGEGNFLPADGETQGELVLRAPWLTMGYFKEPEKSEELWQGGWLHTGDVATL 429

Query: 426 HLDGYVEIKDRAKDIIISGGENISSLEIEEVLYQHPEVVEAAVVARPDSRWGETPHAFVT 485
              GY++I+DR KD+I +GGE +SSL++E+++ +HP V E AVV   D +WGE P A + 
Sbjct: 430 DGMGYIDIRDRIKDVIKTGGEWVSSLDLEDLISRHPAVREVAVVGVADPQWGERPFALLV 489

Query: 486 LR----ADALASGDDLVRWCRE-RLAHFKAPRHVSLV-DLPKTATGKIQKFVLREWARQQ 539
            R     DA A  + L  +  +  +  +  P  ++LV ++PKT+ GK+ K  +R+   Q 
Sbjct: 490 ARDGHDIDAKALKEHLKPFVEQGHINKWAIPSQIALVTEIPKTSVGKLDKKRIRQDIVQW 549

Query: 540 EA 541
           +A
Sbjct: 550 QA 551