Pairwise Alignments

Query, 390 a.a., Acyl-CoA dehydrogenase family protein from Pseudomonas putida KT2440

Subject, 380 a.a., Branched-chain acyl-CoA dehydrogenase (EC 1.3.99.12) from Sphingobium sp. HT1-2

 Score =  160 bits (406), Expect = 4e-44
 Identities = 124/390 (31%), Positives = 186/390 (47%), Gaps = 24/390 (6%)

Query: 3   FTLPDELLALQAKTRDFIAEQVIPFENDPRQNSHGPSDALRQDLVLCARAAGLLTPHASR 62
           F L DE  A+Q   + F A+ + P      ++ H P D +RQ     A   G    + S 
Sbjct: 4   FDLTDEQRAVQELAQRFTADAITPHAAKWDEDHHFPRDTIRQ-----AAELGFGAIYVSE 58

Query: 63  EMGGLELSHVAKAIVFEEAGYS-PLGPVALNIHAPDEGNIHLMDVVATEAQKDRWLRPLV 121
           E GG+ L  +  A++ E   Y  P     ++IH        ++D    EA K R+L  LV
Sbjct: 59  ESGGIGLGRLESALIMEAMAYGCPSTSAFISIH---NMAAWMIDRFGDEAVKQRYLPSLV 115

Query: 122 QGHARSCFAMTEPAPGSGSDPSMLRTTATRDGDDYLINGRKWLITGAEGADFGIIMARM- 180
                + + +TEP+  +GSD + LRT A  DGD Y++ G K  I+G    D  ++M R  
Sbjct: 116 TCETIASYCLTEPS--AGSDAASLRTRAVLDGDHYVVTGSKAFISGGGENDIYVVMVRTG 173

Query: 181 EDGTA--TMFLTDMKRDGIIHERQLDSLDSCFTGGHGQ----LRFDNLRIPASDVLGEIG 234
           EDG    +  + +   +G+    Q   L     G H Q    + FD +R+P ++ +G  G
Sbjct: 174 EDGPKGISCLVIEKNMEGVSFGAQERKL-----GWHSQPTAQVNFDGVRVPVANRVGAEG 228

Query: 235 KGFRYAQVRLAPARLTHCMRWLGAARRAHDIACDYARTRDAFGKPLGEHQGVGFMLADNM 294
           +GF  A   L   RL      LG A+RA D A  Y R R  F + + + Q   F LAD  
Sbjct: 229 QGFAIAMAGLDGGRLNIGACSLGGAQRALDEAVGYTRDRRQFDRAIADFQNTQFTLADME 288

Query: 295 MDLHVVRLAVWHCAWVLDQGRRANVD-SSMAKVISAEALWRVVDRCVQVLGGRGVTGDTV 353
            +L   R  ++  A  + +G       ++MAK  + +    V DR +Q+ GG G   D  
Sbjct: 289 TELQAARSLLYLAAAKVSEGAPDKTKFAAMAKRFATDTGSAVADRALQLHGGYGYLMDYP 348

Query: 354 VERIFRDIRPFRIYDGPSEVHRMSLAKKLL 383
           VERI+RD+R  RI +G +E+ RM  A++LL
Sbjct: 349 VERIWRDLRVHRILEGTNEIMRMITARELL 378