Pairwise Alignments

Query, 376 a.a., 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) from Pseudomonas putida KT2440

Subject, 375 a.a., hypothetical protein from Xanthobacter sp. DMC5

 Score = 53.9 bits (128), Expect = 7e-12
 Identities = 90/326 (27%), Positives = 129/326 (39%), Gaps = 35/326 (10%)

Query: 66  KRLSGGAIQENWLLDLLIEGGPWAGVRRWVLRSDALSALPASL-DREQEFAVLQVVYQAG 124
           ++ +GG    N+LL +      WA     VLR      LP    D  +E  +L  +++  
Sbjct: 59  RQFTGGLANLNFLLRV---SDGWA-----VLRRPPDGPLPPGAHDMAREHRILSHLWREL 110

Query: 125 VKVPRPLWLCRDVRVHGRVFFLMEYVPGSA-AGRALST-GAGPQGRAQLATQLGANLARL 182
              PR L LC D  V G  F LME+  G A  G +L+   A     A L+ +L   LA +
Sbjct: 111 PLAPRSLHLCADASVAGAPFQLMEFRAGIALRGDSLAPFPATAATGADLSHKLVETLAAI 170

Query: 183 HQVRPPCATLCFLSVPDSSPALATID----AYRRYLDTLADAYPVLEWGLRWCELHAPRS 238
           H V P    L  L  P    A         A R     L+ A   +   L   E+    +
Sbjct: 171 HAVDPARIGLSDLGRPAGFFARTAAGWIGRAERVAQGALSPAARAVAGWLAAAEVRDATA 230

Query: 239 STLCLLHRDYRTGNYL--ASEEGLEAVLDWEFTGWGDPCEDLG-----WFTA---RCWR- 287
            T  LLH D++  N L   +     AV+DW+    GDP  DL      W  A    C   
Sbjct: 231 PT--LLHNDFKLDNVLLDPATRAPVAVVDWDMGTRGDPLFDLATLLSYWTEAGDPPCMHE 288

Query: 288 -FTRPDLEAGGIGQLEDFLRGYHEVSSLCIERSRLHYWQVMATLRWAVIALQQGQRHLSG 346
               P    G + + E     Y   +    + S+L  ++V+  L+  V+  Q   RHL+G
Sbjct: 289 LAQMPTARPGFLTRAE-AADAYARATGR--DLSQLKVYRVLTMLKLGVVFHQLHARHLAG 345

Query: 347 EEPSLELA---LTARLLPELELDILH 369
           E      A     A  L +  LDI++
Sbjct: 346 ETADPRYAGFGTLAEALFDFTLDIIN 371