Pairwise Alignments

Query, 376 a.a., 4-hydroxypentanoyl-CoA kinase, subunit LvaA (from data) from Pseudomonas putida KT2440

Subject, 369 a.a., acyl-CoA dehydrogenase, putative phosphotransferase from Variovorax sp. SCN45

 Score = 68.9 bits (167), Expect = 2e-16
 Identities = 72/284 (25%), Positives = 114/284 (40%), Gaps = 36/284 (12%)

Query: 104 LPASLDREQEFAVLQVVYQAGVKVPRPLWLCRDVRVHGRVFFLMEYVPGSAAGRALSTGA 163
           LP++   E+EF V+  +    V VPR   LC D  V GR F++ME++ G         G 
Sbjct: 77  LPSAHAVEREFKVMSGLAGTDVPVPRMYCLCEDEAVIGRAFYVMEFMQGRVLWDQSLPGM 136

Query: 164 GPQGRAQLATQLGANLARLHQVRPPCATLCFLSVPD----------SSPALATIDAYRRY 213
               RA    ++   ++ LH V+     L     P           S    A+ D     
Sbjct: 137 SNAERAAHYDEMNRVISALHTVKFAERGLADYGKPGNYFERQIGRWSKQYKASADG---- 192

Query: 214 LDTLADAYPVLEWGLRWCELHAPRS----STLCLLHRDYRTGNYL--ASEEGLEAVLDWE 267
              L+     +E  + W   H P S    S + ++H DYR  N +  A+E  + AVLDWE
Sbjct: 193 AGELSQPIEAMERLIDWLPAHMPASARDESKVSIVHGDYRLDNVMFHATEPRIIAVLDWE 252

Query: 268 FTGWGDPCEDLGWFTARCWRFTRPDLEAGGIGQLE----------DFLRGYHEVSSLCIE 317
            +  G P  D   F+  C  +  P     GIG ++          +++R Y E + +   
Sbjct: 253 LSTLGHPLAD---FSYHCMSWHMPPSTGRGIGGVDVASLGIPTESEYIRRYCERTRISTP 309

Query: 318 RSRL---HYWQVMATLRWAVIALQQGQRHLSGEEPSLELALTAR 358
            +     +++Q     R A I     +R  +G   S +   +AR
Sbjct: 310 EALAPDWNFYQAYNLFRMAAILQGIAKRVEAGTASSEQAVASAR 353