Pairwise Alignments

Query, 869 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1043 a.a., Multidrug resistance protein MdtC from Xanthobacter sp. DMC5

 Score = 52.8 bits (125), Expect = 1e-10
 Identities = 58/246 (23%), Positives = 108/246 (43%), Gaps = 12/246 (4%)

Query: 230 VAELGTKQDDAQAQLRAYHQVREIIAKYQAAHPEFTDEVFIAGMPIFIAAQQEIIDHDLA 289
           V   G  +    + +  Y +V E +AK +AAHP+ T    I  +   +   +   D++ A
Sbjct: 281 VVAFGVYRAKGFSDVTVYDRVTEELAKLRAAHPDVT----ITEIDTTVRFTKS--DYESA 334

Query: 290 MLFPIVFLLVTSLLVFFFRKPL-GVVLPLFNILFCTIWTLGLMALLRVPMDLLTSVLPVF 348
           M   I   ++  ++VF F + +   ++    I    + T  +M +L   ++ ++ +    
Sbjct: 335 MHTLIEGAILAVIVVFLFLRDIRATLITALAIPLSILPTFWVMDMLGFSLNAVSLLAITL 394

Query: 349 LFTICCADAIHVMAEYYEQLNSGKSFREANRETQRLMVTPVVLTTVTTIATFL-ISTTNN 407
           +  I   DAI  +      +  GKS   A  E    +   VV TT+T  A F  +S    
Sbjct: 395 VTGILVDDAIVEIENIVRHMRMGKSPYRAAIEAADEIGLAVVATTLTIAAVFAPVSFMGG 454

Query: 408 IVS--IRNFGVFMSIGLTAALIISLLLIPAWISIWGKDAVPRKVQLKESLISHYLVVFCA 465
           I     + FG+ ++I +  +L ++ L+ P   + + KD   R  + ++SL+    V   A
Sbjct: 455 IAGQYFKQFGLTVAIAVLFSLAVARLITPLVAAYFMKDTGHR--EGRDSLVMRGYVRLLA 512

Query: 466 WLIRWR 471
           W +R R
Sbjct: 513 WSVRHR 518