Pairwise Alignments

Query, 869 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 1014 a.a., putative Multidrug efflux RND transporter from Pseudomonas putida KT2440

 Score = 55.8 bits (133), Expect = 1e-11
 Identities = 75/302 (24%), Positives = 126/302 (41%), Gaps = 27/302 (8%)

Query: 233 LGTKQDDAQAQLRAYHQVREIIAKYQAAHPEFTDEVFIAGMPIFIAAQQEIIDHDLAMLF 292
           +G K   A   L    +VR I+ + ++  P   +         FI A    ID  +  L 
Sbjct: 282 IGIKATPAANPLDVIKEVRRIMPELESQLPSALNVSIAYDATRFIQAS---IDEVIKTLG 338

Query: 293 PIVFLLVTSLLVFFFRKPL-GVVLPLFNILFCTIWTLGLMALLRVPMDLLTSVLPVFLFT 351
             V +++  ++VF F   L  V++P+  I    I  L  M ++   ++LLT +  V    
Sbjct: 339 EAVLIVI--VVVFLFLGALRSVLIPVVTIPLSMIGVLFFMQMMGYSLNLLTLLAMVLAIG 396

Query: 352 ICCADAIHVMAEYYEQLNSGKSFREANRETQRLMVTPVVLTTVTTIAT-----FLISTTN 406
           +   DAI V+   +  +  GKS  +A  E  R +  PVV  T+T  A      FL   T 
Sbjct: 397 LVVDDAIVVVENIHRHMEEGKSPFDAALEGAREIAMPVVSMTITLAAVYAPIGFLTGLTG 456

Query: 407 NIVSIRNFGVFMSIGLTAALIISLLLIPAWISIW------GKDAVPRKVQLKESLISHYL 460
            +   + F + ++  +  + I++L L P   ++             R  QL E L   Y 
Sbjct: 457 AL--FKEFALTLAGAVIISGIVALTLSPMMCALLLRREQNPSGLAHRLDQLFERLKGRYQ 514

Query: 461 VVFCAWLIRWRKPVLLV----TLPLLAMMTVFTFK--VDIEDSGIAYFKKDSPVRMSDEF 514
            +  A L    +PV+LV     L L+ ++  FT       ED G+ +    SP   + ++
Sbjct: 515 RLLHATLD--SRPVVLVFAVIILCLIPVLLKFTQNELAPNEDQGVIFMMSSSPQPANLDY 572

Query: 515 IN 516
           +N
Sbjct: 573 LN 574



 Score = 36.6 bits (83), Expect = 8e-06
 Identities = 29/125 (23%), Positives = 60/125 (48%), Gaps = 20/125 (16%)

Query: 330 LMALLRVPMDLLTSVLPVF-------------LFTICCADAIH--VMAEYYEQLNS--GK 372
           L+ L+ VP+ +  ++LP+F             L T+    + H  ++ E+  QL    G 
Sbjct: 872 LVILVTVPLSICGALLPLFLGVSSMNIYTQVGLVTLIGLISKHGILIVEFANQLRDERGL 931

Query: 373 SFREANRETQRLMVTPVVLTTVTTI---ATFLISTTNNIVSIRNFGVFMSIGLTAALIIS 429
           S REA  E   + + PV++TT   +      ++++    VS  + G+ ++ G++   + +
Sbjct: 932 SVREAIEEAAAIRLRPVLMTTAAMVFGMVPLILASGAGAVSRFDIGMVIATGMSIGTLFT 991

Query: 430 LLLIP 434
           L ++P
Sbjct: 992 LFVLP 996