Pairwise Alignments

Query, 869 a.a., putative Transporter from Pseudomonas putida KT2440

Subject, 867 a.a., efflux transporter, putative, hydrophobe/amphiphile efflux-3 (HAE3) family from Alteromonas macleodii MIT1002

 Score =  154 bits (388), Expect = 3e-41
 Identities = 168/764 (21%), Positives = 329/764 (43%), Gaps = 106/764 (13%)

Query: 170 QEMASMADLENISLSADGEL---WIHKTLHALDMDPIKVEAQIMGNEQMVGGVVSADKKV 226
           Q++ S + ++NI+    GEL   W+     A   +  K+   I     + G + S+ K  
Sbjct: 121 QDVMSFSTVDNITQGDSGELKFSWMMPNAPASQEEAGKIAEAIARLPMLQGTLASSSKNA 180

Query: 227 AMVVAELGTKQDDAQAQLRAYHQVREIIAKYQAAHPEFTDEVFIAGMPIFIAAQQEIIDH 286
           A +   +  K +      R    +R  I    A     T +  I G+P+  A  Q  ++ 
Sbjct: 181 AAIYVPIKDKNES----FRIAEDIRAFIG---ANTTNETLQWHITGLPV--AEDQFGVEM 231

Query: 287 --DLAMLFPIVFLLVTSLLVFFFRKPLGVVLPLFNILFCTIWTLGLMALLRVPMDLLTSV 344
              +A+  P   L++  LL  FFR    +  P+   +   I T+G +  L   + +++S+
Sbjct: 232 FIQMAISAPAAGLMIFILLFVFFRNFTLITAPMVVAMATVIITMGALIGLGFTVHIMSSM 291

Query: 345 LPVFLFTICCADAIHVMAEYYEQLNSGKSFREANRETQRLMVTPVVLTTVTTIATFLIST 404
           + +FL  I   D++H+++E+ ++   G+   +        +  P++ T++T+ A F    
Sbjct: 292 IAIFLMPIAVVDSVHILSEFSDRYKPGQKADDVITTVVEHLFQPMLYTSLTSAAGFYSLM 351

Query: 405 TNNIVSIRNFGVFMSIGLTAALIISLLLIPAWISIWGKDAVPRKVQLKESLISHYLVVFC 464
              I  ++ FG F+  G+  A II+L  IPA+IS    +A+  K+Q      ++   V  
Sbjct: 352 LTPIPPVQIFGAFIGSGILLAFIITLTFIPAYISRMSPEAL-AKLQAALHTDANSSSVKA 410

Query: 465 AWLIRW----------RKPVLLVTLPLLAMMTVF-TFKVDIEDSGIAYFKKDSPVRMSDE 513
            +L R+           K  LLV   +++ ++V+  F++ I D+ + +FK++  +R++D+
Sbjct: 411 TYLQRFVYGIRNVALNYKGALLVAFMVISAVSVWGIFQIQINDNPVRWFKENHEIRVADK 470

Query: 514 FINRAGVAGTSPGWIAF-DTKTPRGA-LTTETVQFLDRLDQFIKAQPNVSYTYSVATYIK 571
            +N+   AGT   +I   DT+  + A    ++      LD++ K   +     +     +
Sbjct: 471 ALNKE-FAGTYNAYIVIQDTRKLKSAGEILQSAVLPSSLDEWRKTTLDTLNNENAGNNYE 529

Query: 572 RMNLVLNDM---------NPAFLRVPQAVEQVTVVDDDGKPETFDVDGNSLIEQHIMMF- 621
            +   ++D            A  R+  +++++      G  +TF    N  +   +  + 
Sbjct: 530 TLAFAVDDALFGDLDSNEYDALNRLLSSIDEI-----KGTSKTFQQPDNVALLSDLQSYL 584

Query: 622 ---------------------ENGGGTDLQNVL-NADYSKAVTLFTMTSS---------V 650
                                E   G D   VL N   + A TL    SS         V
Sbjct: 585 STQTLVGKTQSLSDVVKVVNRELHSGNDSDYVLPNTQPAIAQTLLQYQSSHRPQDLWHFV 644

Query: 651 AGDYQAMLDKLDAWLAINKPANLQVTHA---------------GTPYIWTG------VLQ 689
             DY+  L     WL ++   N  +T                 G  Y W G      V Q
Sbjct: 645 TPDYRKTL----VWLQLSSGDNQDMTEVIELVDNYFAQHPLPDGLTYQWAGKAYLNVVWQ 700

Query: 690 E-ITQGQVLSFSLALLAVTLMMMFWLKSVRLGILGMLTLLTTSVTVYGSMYLLDIELNIG 748
           + +  G + S   A + V +MM+  L+S+  G+L ML L  T   +YG++ ++  + ++ 
Sbjct: 701 DNMVAGMLDSLLSAFIIVFVMMVLLLRSLVFGLLAMLPLTITITFIYGAIGIVGKDYDMP 760

Query: 749 TTLVTFLVVGV-VDYAVHLLSRIKMLVQKGIEIDEAILAAMQGVGRSTVVNVVIFSMGFV 807
             +++ L +G+ VD+A+H L+R K + ++  +++  + A  +    +   N ++ ++GF 
Sbjct: 761 IAVLSALTLGLSVDFAIHFLARAKEIYKQTGDVNATLSAMFEEPASAITRNALVIALGFT 820

Query: 808 ALLFSAYKPVIDLGVLVILALSSSGFMTILL----VTLISPWFF 847
            LL +   P I +G+ +   +  S  +T+L+    +TL+  W F
Sbjct: 821 PLLLAPLVPYITVGIFLASIMFISALVTLLVLPAAMTLLKRWVF 864



 Score = 37.7 bits (86), Expect = 3e-06
 Identities = 86/473 (18%), Positives = 181/473 (38%), Gaps = 75/473 (15%)

Query: 6   NFVERYARAIVFVLVAITAYFTYTLGALMSDTNPYL-LKDTHPARKTIIDLQREFTGTYD 64
           N    Y  A++   + I+A   + +  +  + NP    K+ H  R     L +EF GTY+
Sbjct: 422 NVALNYKGALLVAFMVISAVSVWGIFQIQINDNPVRWFKENHEIRVADKALNKEFAGTYN 481

Query: 65  SVMVALNNPVSVFNTTSLNAQFELSQAIRQLMLANDEDRVELQRIVGLHSDDPDAQGLLV 124
           + +V       + +T  L +  E+ Q+    +L +  D      +  L++++        
Sbjct: 482 AYIV-------IQDTRKLKSAGEILQS---AVLPSSLDEWRKTTLDTLNNEN-------- 523

Query: 125 QILAEGFSQNDYAAAKALRDHGIARHWDSHDLQFLSFLAERINPIQEMA-SMADLENISL 183
                  + N+Y       D  +    DS++   L+ L   I+ I+  + +    +N++L
Sbjct: 524 -------AGNNYETLAFAVDDALFGDLDSNEYDALNRLLSSIDEIKGTSKTFQQPDNVAL 576

Query: 184 SADGELW-------------------IHKTLHA-LDMDPI-----------KVEAQIMGN 212
            +D + +                   +++ LH+  D D +            ++ Q    
Sbjct: 577 LSDLQSYLSTQTLVGKTQSLSDVVKVVNRELHSGNDSDYVLPNTQPAIAQTLLQYQSSHR 636

Query: 213 EQMVGGVVSADKKVAMVVAEL--GTKQDDAQAQLRAYHQVREIIAKYQAAHPEFTDEVF- 269
            Q +   V+ D +  +V  +L  G  QD          +V E++  Y A HP      + 
Sbjct: 637 PQDLWHFVTPDYRKTLVWLQLSSGDNQD--------MTEVIELVDNYFAQHPLPDGLTYQ 688

Query: 270 IAGMPIFIAAQQEIIDHDLAMLFPIVFLLVTSLLVFFFRKPLGVVLPLFNILFCTIWTLG 329
            AG        Q+ +   +       F++V  ++V   R  +  +L +  +     +  G
Sbjct: 689 WAGKAYLNVVWQDNMVAGMLDSLLSAFIIVFVMMVLLLRSLVFGLLAMLPLTITITFIYG 748

Query: 330 LMALLRVPMDLLTSVLPVFLFTICCADAIHVMA---EYYEQLNSGKSFREANRETQRLMV 386
            + ++    D+  +VL      +    AIH +A   E Y+Q     +   A  E     +
Sbjct: 749 AIGIVGKDYDMPIAVLSALTLGLSVDFAIHFLARAKEIYKQTGDVNATLSAMFEEPASAI 808

Query: 387 TPVVLTTVTTIATFLISTTNNIVSIRNFGVFMSIGLTAALIISLLLIPAWISI 439
           T   L         L++    +V     G+F++  +  + +++LL++PA +++
Sbjct: 809 TRNALVIALGFTPLLLAP---LVPYITVGIFLASIMFISALVTLLVLPAAMTL 858