Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 283 a.a., glycine/betaine ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score = 64.7 bits (156), Expect = 3e-15
 Identities = 76/333 (22%), Positives = 134/333 (40%), Gaps = 64/333 (19%)

Query: 10  AGFALLAALVPATASFAKDKIVIGE-QNWTGAIAIQYILGDIISNRLDGEVSYLAGDLPI 68
           A   L+ A+    AS     + IG    W+ ++A  ++  ++I ++L  +V   A    I
Sbjct: 9   AAATLVVAMSSTLASADSKTLSIGYVDGWSDSVATTHVAAEVIKSKLGYDVKLQAVATGI 68

Query: 69  LFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQ-GFYIPGYIQD 127
           ++   A G   +D +   WLP       +Y       ++     +   + G  +P Y++ 
Sbjct: 69  MWQGVATG--KLDAMLSAWLP---VTHGEYWAKNKDKVVDYGPNFKDAKIGLIVPEYVK- 122

Query: 128 KYNVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKA-KDFGFDGNFESVS 186
               KS+ DLK     K            +VG        +   +A K +G D   ++ S
Sbjct: 123 ---AKSIEDLKTDTTFK----------NKIVGIDAGSGVMLKTDEAIKQYGLDYKLQASS 169

Query: 187 TEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNKKGDPLYKA 246
             A +  A+L  A   +  +    + P W+F+ + LR LD+P          KG  +Y A
Sbjct: 170 GAAMI--AELTRAEDKQESIAVTGWVPHWMFAKWKLRFLDDP----------KG--IYGA 215

Query: 247 DGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENVS-IDPASL 305
                  + TV++                   + S  L ++AP +AAFL+         +
Sbjct: 216 -------AETVNS-------------------IGSKGLEKKAPEVAAFLKKFQWASKDEI 249

Query: 306 NDLILKIEREKQPADAAAKAWVAANQATVDRWL 338
            +++L I+   +P DAAAK WVA +   V  W+
Sbjct: 250 GEVMLAIQEGAKP-DAAAKDWVAKHPERVAEWV 281