Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 287 a.a., choline / betaine / carnitine ABC transporter - substrate binding protein BetX from Pseudomonas putida KT2440

 Score = 59.3 bits (142), Expect = 1e-13
 Identities = 76/340 (22%), Positives = 136/340 (40%), Gaps = 66/340 (19%)

Query: 1   MTRFLSRGLAGFALLAALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVS 60
           M RFL  G A    L   + A  + AK+  +     W  ++A   +  ++I  +L  +V 
Sbjct: 8   MRRFLGVGTA----LVMAMSAAQAMAKEVSIGYVDGWADSVATTNVAAEVIKQKLGYDVK 63

Query: 61  YLAGDLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQ-GF 119
             A    I++   A G   +D +   WLP       +Y      +++     +   + G 
Sbjct: 64  LQAVATGIMWQGVATG--KLDAMLSAWLP---VTHGEYWAKNKDNVVDYGPNFKDAKIGL 118

Query: 120 YIPGYIQDKYNVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYIGQIKA-KDFGF 178
            +P Y++      S+ DLK     K            +VG        +   +A KD+G 
Sbjct: 119 IVPEYVK----AVSIADLKTDNSFK----------DRIVGIDAGSGVMLKTDQAIKDYGL 164

Query: 179 DGNFESVSTEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNK 238
                  S+ A++T A+L  AY  ++ +    + P W+F+ + L+ L++P          
Sbjct: 165 TSYKLQASSGAAMT-AELGRAYAKQQSIAVTGWVPHWMFAKWKLKFLEDP---------- 213

Query: 239 KGDPLYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENV 298
           KG  +Y A       + TV++                   + S  L  +AP +A FL+  
Sbjct: 214 KG--VYGA-------AETVNS-------------------IGSKELATKAPEVAEFLKKF 245

Query: 299 SIDPA-SLNDLILKIEREKQPADAAAKAWVAANQATVDRW 337
           +      + +++L I+   +P +AAAK WVA +   V  W
Sbjct: 246 NWQSKDEIGEVMLAIQEGAKP-EAAAKDWVAKHPDRVKEW 284