Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 345 a.a., glycine betaine transporter periplasmic subunit from Agrobacterium fabrum C58

 Score = 74.3 bits (181), Expect = 4e-18
 Identities = 84/364 (23%), Positives = 156/364 (42%), Gaps = 55/364 (15%)

Query: 4   FLSRGLAGFALLAALVPATASFAKDKIVIGEQN----WTGAIAIQYILGDIISNRLDG-- 57
           F S  L    ++AA +P  +S +  ++    +      + ++   Y++  I++   +   
Sbjct: 5   FKSFALLASTIVAASLPVLSSASAAELPGDGKTIRFAQSDSLGANYVVAKIVTKGFEALG 64

Query: 58  -EVSYLAGDLPILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVG- 115
            +V     +  + F A A+GD  +D+ TDI  P +   F K         + +K   +G 
Sbjct: 65  YKVKLSTVNTTLFFQAVAQGD--LDIATDINFPQREPGFRK---------VADKADMIGK 113

Query: 116 --VQGFYIPGYIQDK-----YNVKSVYDLKKPEVAKLFAPLGGGKSQLLVGPAGWESTYI 168
             ++G  I GY+ DK     YN+K++  +K P++A LF     GK+ L+    GW    +
Sbjct: 114 GLIEGGGINGYLIDKKTADAYNIKTLDQMKDPKIAALFGT--DGKADLINCDPGWSCGDV 171

Query: 169 GQIKAKDFGFDGNFESVSTEASVTYAKLDAAYKAERGVIFYAYTPDWIFSAY----DLRR 224
            + +   FG     +SV  +      +  A  K    V FYA++P W+  A     D+  
Sbjct: 172 VEYQLDKFGLKDTVKSVRGKYEALMVEAVARAKRGEPVFFYAWSPSWMNKALQPGKDVVW 231

Query: 225 LDEPPFDGY--AQDNKKGDPLYKADGCWKFISP--TVDADWLNKSSITCAYPDAKVHILA 280
           L   PFD    +  +   + +   +GC    +P     A W N +++             
Sbjct: 232 L-PTPFDALPPSVPSSGTNAVANVEGCAGAANPCRMAMAAW-NWTAV------------G 277

Query: 281 SSALRQRAPRIAAFLENVSIDPASLNDLILKIEREKQPADAAAK----AWVAANQATVDR 336
           +    +  P + +F+EN+S  P S      +   +K  +DA  +    AW++ N+A +D 
Sbjct: 278 NKEFLKENPEVKSFVENMSF-PLSTWSSWEQAISQKGGSDATVRGLSDAWLSENKALLDG 336

Query: 337 WLSA 340
           W++A
Sbjct: 337 WITA 340