Pairwise Alignments

Query, 348 a.a., putative glycine betaine/L-proline ABC transporter, periplasmic component from Pseudomonas putida KT2440

Subject, 336 a.a., ABC transporter, substrate binding protein from Agrobacterium fabrum C58

 Score = 72.4 bits (176), Expect = 2e-17
 Identities = 80/337 (23%), Positives = 143/337 (42%), Gaps = 28/337 (8%)

Query: 9   LAGFALLA-ALVPATASFAKDKIVIGEQNWTGAIAIQYILGDIISNRLDGEVSYLAGDLP 67
           + GF   A A   A A+     I I E NW  A    Y+   I+ N  D  V+ ++GD  
Sbjct: 11  VTGFITAAGAANSANAAETCGNITIAEMNWASAGVAAYVDKFIMENGYDCTVNVISGDTT 70

Query: 68  ILFAAAAKGDGSVDVLTDIWLPNQSAAFAKYVTGGTHSLIPNKQPYVGVQGFYIPGYIQD 127
             F +  +  G  D+  ++W+      + + V  G            GV+G++IP Y+ D
Sbjct: 71  PTFTSMNE-KGQPDMAPEMWVNTLGTPYEEAVKKGNLIQEVKILSEGGVEGWWIPKYLAD 129

Query: 128 KY-NVKSVYD-LKKPEVAKLFAPLGGGKSQLLVGPAGW--ESTYIGQIKAKDFGFDGNFE 183
           ++ ++K+V D LK PE+    AP    K  +   P GW  + T     KA+     G F 
Sbjct: 130 EHPDIKTVEDALKHPELFP--APEDASKGAVFGCPPGWGCQPTTANLFKARKADEKG-FA 186

Query: 184 SVST-EASVTYAKLDAAYKAERGVIFYAYTPDWIFSAYDLRRLDEPPFDGYAQDNKKGDP 242
            + T  A+     +  AY+ ++G + Y ++P  I   YD+ +LD    DG A D +  D 
Sbjct: 187 LIDTGSAAGLDGSISNAYEKKQGWLGYYWSPTAILGKYDMVKLD----DGVALDREAYDT 242

Query: 243 LYKADGCWKFISPTVDADWLNKSSITCAYPDAKVHILASSALRQRAPRIAAFLENVSIDP 302
                 C     P  +           AYP A+V  + +    ++A     ++     D 
Sbjct: 243 CIAKPDC---ADPKPN-----------AYPVAEVFTVVTKDFAEKAGPSIDYIRKRQWDN 288

Query: 303 ASLNDLILKIEREKQPADAAAKAWVAANQATVDRWLS 339
           A++  ++  ++  +   +  A+ ++  ++    +W+S
Sbjct: 289 ATVAGVLAWMDDNQGTNEDGAEYFLENHEDIWTKWVS 325