Pairwise Alignments

Query, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

Subject, 370 a.a., spermidine/putrescine ABC transporter ATP-binding protein from Pseudomonas simiae WCS417

 Score =  184 bits (467), Expect = 6e-51
 Identities = 103/268 (38%), Positives = 152/268 (56%), Gaps = 10/268 (3%)

Query: 25  LGSVSIHDIALEFRAVTKRYEGSRSDSTNAVEQVNLAVRRGEVLCLMGTSGSGKSTLLRH 84
           +  V  +D+ + FR V K Y+G        V+ +NL +R+GE L L+G SGSGK+T L  
Sbjct: 1   MSEVDSNDVLVSFRGVQKSYDGENL----IVKDLNLEIRKGEFLTLLGPSGSGKTTSLMM 56

Query: 85  VNRLIEPSSGEVLIDGEVLSSLTQPTLRQLRSQRIGMVFQHFGLLPHRSVLDNVALPLEL 144
           +     P++GE+ + G  ++++          + IGMVFQ++ L PH +V +N+A PL +
Sbjct: 57  LAGFETPTAGEIQLAGRSINNVPP------HKRDIGMVFQNYALFPHMTVAENLAFPLSV 110

Query: 145 RGEPESTRRTAALRQLQAVGLKAWSERFPHELSGGMQQRVGLARALVTNPDILLMDEPFS 204
           R   ++       R L  V L A+++R+P +LSGG QQRV LARALV  P ++LMDEP  
Sbjct: 111 RALSKTDISERVKRVLSMVQLDAFAQRYPAQLSGGQQQRVALARALVFEPQLVLMDEPLG 170

Query: 205 ALDPTIRRDLQGRFLQLVRERGITTLLVTHDPGEALRLADRIAVLRGGRLIQVGTPGELL 264
           ALD  +R  +Q     L +  G+T + VTHD GEAL ++DR+AV   G + Q+  P  L 
Sbjct: 171 ALDKQLREHMQMEIKHLHQRLGVTVVYVTHDQGEALTMSDRVAVFHQGEIQQIAAPRTLY 230

Query: 265 EHPADEGVAVFFDERPHIGPSIASSSDE 292
           E P +  VA F  E   +   + S S E
Sbjct: 231 EEPKNTFVANFIGENNRLNGRLHSHSGE 258