Pairwise Alignments

Query, 698 a.a., glycine betaine ABC transporter, ATPase/permease fusion protein from Pseudomonas putida KT2440

Subject, 278 a.a., proline/glycine betaine ABC transporter permease from Dickeya dianthicola ME23

 Score =  205 bits (522), Expect = 2e-57
 Identities = 107/251 (42%), Positives = 164/251 (65%), Gaps = 2/251 (0%)

Query: 444 FVGVIVAVRTVINGVEGALGWI-PWPVPALALVYLAWRSAGAILALTTALALGYIGLFGF 502
           F GV   +     G+E  +G + PW +  +A+   AWR  G   AL T LA  YI   G+
Sbjct: 26  FDGVARVIDGFAGGLEELVGALSPWGLVIIAVGLGAWR-IGKGFALFTLLATLYIIYSGY 84

Query: 503 WERTISTIALVGASVLLSLLIGIPTGILLAKRALARRLVTPLLDVMQTLPTFVYLIPAVA 562
            +    T+AL  +S   SLLIGIP GI  A+RA    +V  LLD MQT+P FVYLIPA  
Sbjct: 85  SDHAAVTLALTLSSTFFSLLIGIPLGIWSARRATVGSIVRTLLDFMQTMPAFVYLIPATI 144

Query: 563 FFSVGKTPAVIATVIFALAPMIRLTALGIQEVPKAAVEAAVAHGATPWQTLTRVELPLAS 622
            F +G+ P + AT++F++ P++RLT LGI++V  A +EA +A G TPWQ L +V+LP A 
Sbjct: 145 LFGLGRPPGIFATILFSMPPVVRLTDLGIRQVNVARLEAGIAFGCTPWQLLWKVQLPAAQ 204

Query: 623 GSLLLGVNQTIVMSLSMVVVAALIGAGGLGYDVMTALRNIKGGEGVLAGIAIVFCALVPD 682
            S++ G+NQTI+M++SMV++A+++GAGGLG D++++++ ++ G G+ +G+ +V  A++ D
Sbjct: 205 PSIMAGINQTIMMAMSMVIIASMVGAGGLGNDILSSIQQLEIGLGLQSGLVVVLMAILLD 264

Query: 683 RIIQASLRKRH 693
           R+  +   +RH
Sbjct: 265 RLSASFAHRRH 275



 Score = 28.9 bits (63), Expect = 3e-04
 Identities = 51/225 (22%), Positives = 83/225 (36%), Gaps = 47/225 (20%)

Query: 341 LAMLAGAWREGAGWLSATALAVLLVNRLGCAWVSLHGHGRDSPGVALPLAL------LLV 394
           +A+  GAWR G G+   T LA L +         ++    D   V L L L      LL+
Sbjct: 55  IAVGLGAWRIGKGFALFTLLATLYI---------IYSGYSDHAAVTLALTLSSTFFSLLI 105

Query: 395 SQALTVW---RALTPEAAGTLVQFPSDRDSMLAAAGAIDALI----GWSQVTFESAFVGV 447
              L +W   RA       TL+ F     +M A    I A I    G     F +    +
Sbjct: 106 GIPLGIWSARRATVGSIVRTLLDF---MQTMPAFVYLIPATILFGLGRPPGIFATILFSM 162

Query: 448 IVAVRTVINGVEG----------ALGWIPW------PVPALALVYLAWRSAGAILALTTA 491
              VR    G+            A G  PW       +PA     +A  +   ++A++  
Sbjct: 163 PPVVRLTDLGIRQVNVARLEAGIAFGCTPWQLLWKVQLPAAQPSIMAGINQTIMMAMSMV 222

Query: 492 LALGYIGLFGFWERTISTIALVGASVLLSLLIGIPTGILLAKRAL 536
           +    +G  G     +S+I        L + +G+ +G+++   A+
Sbjct: 223 IIASMVGAGGLGNDILSSIQ------QLEIGLGLQSGLVVVLMAI 261