Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 470 a.a., Transcriptional regulatory protein ZraR from Xanthobacter sp. DMC5

 Score =  235 bits (599), Expect = 2e-66
 Identities = 119/241 (49%), Positives = 164/241 (68%), Gaps = 7/241 (2%)

Query: 28  SQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFSESLVE 87
           ++A+ A +++V P  ++VLI GE+GTGKE+ AR +H +S R   PFV VNC A +  ++E
Sbjct: 182 TRAVRAMIERVGPMPSTVLITGESGTGKEVTARALHAVSARAAKPFVPVNCAAIAPEIIE 241

Query: 88  AELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGS 147
           +ELFGH KGAFTGA +++ G F    GGTLFLDE+G+LP A+Q KLLRV+++R+V  +G+
Sbjct: 242 SELFGHLKGAFTGAASSREGLFFYAQGGTLFLDEVGELPPAMQSKLLRVIEDRKVRPVGA 301

Query: 148 RKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPLTRHFI 207
            + IP+DVR+VAATN  L   +AAG FR+DLYYRLNVV++ L PLRERP D+ PL   FI
Sbjct: 302 EREIPVDVRLVAATNANLTAQVAAGRFRQDLYYRLNVVNIHLAPLRERPEDVAPLAHMFI 361

Query: 208 KTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLL-------VCRNGLVQDD 260
                RLG   + L+      L  Y WPGN+REL NVI  +L+       V   G+ +++
Sbjct: 362 AELSARLGVPPLDLTEPVLTFLTRYPWPGNVRELRNVIERSLILGDFPRDVVPEGVAEEE 421

Query: 261 D 261
           D
Sbjct: 422 D 422