Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 458 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  258 bits (659), Expect = 2e-73
 Identities = 127/243 (52%), Positives = 176/243 (72%), Gaps = 1/243 (0%)

Query: 23  FEDARSQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFS 82
           FE A +Q LL    +VA S+++VLI GE+GTGKE++AR+IH  S R   PF+A+NC A  
Sbjct: 133 FEPASAQ-LLELAARVARSDSTVLISGESGTGKEVLARYIHQQSTRAKQPFIAINCAAIP 191

Query: 83  ESLVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREV 142
           ++++EA LFGHEKG+FTGA+AA+AG FE+ +GGT+ LDEI ++P+ +Q KLLRVLQEREV
Sbjct: 192 DNMLEATLFGHEKGSFTGAIAAQAGKFEQADGGTILLDEISEMPLGLQAKLLRVLQEREV 251

Query: 143 VRLGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPL 202
            R+G+RK I +D+RVVA TN  L   +AAG FREDL+YRL+V  L   PLRERP DI+PL
Sbjct: 252 ERVGARKPIQLDIRVVATTNRDLAGEVAAGRFREDLFYRLSVFPLAWRPLRERPADIIPL 311

Query: 203 TRHFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLVCRNGLVQDDDL 262
               +  +  ++ + +  LS EA+  L++Y WPGN+REL+N I   L++ + GL+Q  D 
Sbjct: 312 AERLLNNHVKKMKHAQAGLSAEAQACLIAYPWPGNVRELDNAIQRALILQQGGLIQPQDF 371

Query: 263 RLS 265
            L+
Sbjct: 372 CLA 374