Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 367 a.a., Fis family transcriptional regulator from Pseudomonas simiae WCS417

 Score =  588 bits (1517), Expect = e-173
 Identities = 299/367 (81%), Positives = 328/367 (89%)

Query: 1   MQLLTLPPSPSLATSIRATAQVFEDARSQALLAHLQQVAPSEASVLIIGETGTGKELVAR 60
           MQLLTLPPSP+LATSIRATAQVFED +SQALL H+QQVAPSEASVLIIGETGTGKELVAR
Sbjct: 1   MQLLTLPPSPALATSIRATAQVFEDPKSQALLDHIQQVAPSEASVLIIGETGTGKELVAR 60

Query: 61  HIHNLSGRRNGPFVAVNCGAFSESLVEAELFGHEKGAFTGALAAKAGWFEEGNGGTLFLD 120
           HIHNLS RRN PFVAVNCGAFSESLVEAELFGHEKGAFTGAL+AKAGWFEE +GGTLFLD
Sbjct: 61  HIHNLSARRNRPFVAVNCGAFSESLVEAELFGHEKGAFTGALSAKAGWFEEADGGTLFLD 120

Query: 121 EIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVVAATNVQLDKAIAAGNFREDLYY 180
           EIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRV+AATNVQL+KAI AG+FREDLYY
Sbjct: 121 EIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVLAATNVQLEKAINAGHFREDLYY 180

Query: 181 RLNVVSLQLYPLRERPGDILPLTRHFIKTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRE 240
           RL+VVSL+L PLR+RPGDILPLTRHFI+ Y  RLGYG + +S EAE KL SY WPGNIRE
Sbjct: 181 RLDVVSLELSPLRDRPGDILPLTRHFIEAYSQRLGYGPITISREAEHKLKSYSWPGNIRE 240

Query: 241 LENVIHHTLLVCRNGLVQDDDLRLSHLRIERQDKSPVSTAESAEEQLLRAFQRLFEEQAG 300
           LENVIHHTLL+CR+G+++ DDLRLS++RIERQD S   T  SAE  L RAFQ+LFEEQAG
Sbjct: 241 LENVIHHTLLICRDGVIERDDLRLSNMRIERQDDSQHGTDNSAEALLARAFQKLFEEQAG 300

Query: 301 GLHEKVEDSLLRSAYRFCHCNQVHTASLLGLSRNITRARLIAIGELVVNRRRPEPQTRPE 360
            LHEKVED+LLR+AYRF H NQVHTA+LLGLSRN+TR RLI IGEL VN+RRP    + E
Sbjct: 301 ALHEKVEDALLRAAYRFSHYNQVHTANLLGLSRNVTRTRLIKIGELAVNKRRPGENVQGE 360

Query: 361 RAMQLSI 367
           R + LSI
Sbjct: 361 RMLHLSI 367