Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 451 a.a., two component system AtoC DNA-binding transcriptional activator from Pseudomonas putida KT2440

 Score =  256 bits (654), Expect = 8e-73
 Identities = 129/238 (54%), Positives = 171/238 (71%)

Query: 28  SQALLAHLQQVAPSEASVLIIGETGTGKELVARHIHNLSGRRNGPFVAVNCGAFSESLVE 87
           S+ LL    +VA S+++VLI GE+GTGKE++AR+IH  S R   PFVA+NC A  ++++E
Sbjct: 135 SRQLLELAARVARSDSTVLISGESGTGKEVLARYIHQQSPRAAQPFVAINCAAIPDNMLE 194

Query: 88  AELFGHEKGAFTGALAAKAGWFEEGNGGTLFLDEIGDLPMAIQVKLLRVLQEREVVRLGS 147
           A LFGHEKGAFTGA+AA+AG FE+  GGTL LDEI ++PMA+Q KLLRVLQEREV R+G 
Sbjct: 195 ATLFGHEKGAFTGAIAAQAGKFEQAEGGTLLLDEISEMPMALQAKLLRVLQEREVERVGG 254

Query: 148 RKSIPIDVRVVAATNVQLDKAIAAGNFREDLYYRLNVVSLQLYPLRERPGDILPLTRHFI 207
           RK I +D+RV+A TN  L   +AAG FREDLYYRL+V  L   PLRERPGDIL L    +
Sbjct: 255 RKPISLDIRVLATTNRDLAGEVAAGRFREDLYYRLSVFPLAWRPLRERPGDILQLAERLL 314

Query: 208 KTYCNRLGYGEVRLSPEAERKLVSYDWPGNIRELENVIHHTLLVCRNGLVQDDDLRLS 265
             +  ++ +  VRLSP A   L +Y WPGN+REL+N +   L++ + G+++  D  L+
Sbjct: 315 ARHVAKMKHASVRLSPAARACLQAYAWPGNVRELDNALQRALILQQGGVIEAADFCLA 372