Pairwise Alignments

Query, 367 a.a., Sigma-54 dependent transcriptional regulator from Pseudomonas putida KT2440

Subject, 470 a.a., sigma-54 dependent transcriptional regulator from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  254 bits (648), Expect = 4e-72
 Identities = 142/355 (40%), Positives = 207/355 (58%), Gaps = 19/355 (5%)

Query: 2   QLLTLPPSPSLATSIRATA------QVFEDARSQALLAHLQQVAPSEASVLIIGETGTGK 55
           + + LPP   L  ++ +         +  D   +A+L    QVA SEAS+LI GE+G GK
Sbjct: 95  EFIPLPPDAELIAAVLSAVADDEKPMISADPSMKAVLQLADQVARSEASILITGESGVGK 154

Query: 56  ELVARHIHNLSGRRNGPFVAVNCGAFSESLVEAELFGHEKGAFTGALAAKAGWFEEGNGG 115
           E++AR++H  S R   PF++VNC A  ++L+E+ELFGHEKGAFTGA+A + G FEE +GG
Sbjct: 155 EVMARYLHEHSRRSERPFISVNCAAIPDNLLESELFGHEKGAFTGAVARRIGKFEEADGG 214

Query: 116 TLFLDEIGDLPMAIQVKLLRVLQEREVVRLGSRKSIPIDVRVVAATNVQLDKAIAAGNFR 175
           TL LDEI ++   +Q KLLR +QER + R+G  K + +++R++A +N  L KA+A G FR
Sbjct: 215 TLLLDEISEMDARLQAKLLRAIQERVIDRVGGSKPVSVNIRIIATSNRDLAKAVAEGTFR 274

Query: 176 EDLYYRLNVVSLQLYPLRERPGDILPLTRHFIKTYCNRLGYGEVRLSPEAERKLVSYDWP 235
           EDL YRLNVV+L+L  LRERPGDI+ L  HFIK Y    G     +S  A + + ++ WP
Sbjct: 275 EDLLYRLNVVNLRLPSLRERPGDIVVLADHFIKKYAAANGVPVRPISAAARQAISAHRWP 334

Query: 236 GNIRELENVIHHTLLVCRNGLVQDDDLRL----------SHLRIERQDKSPVSTAESAEE 285
           GN+RELEN +H  +L+     +  D +RL          + +   +  ++P +   +   
Sbjct: 335 GNVRELENAMHRAVLLATGPEIDVDAIRLPDGQPLGGMGAGMMAGQAYEAPQAGVAARAA 394

Query: 286 QLLRAFQRLFEEQAGGLHEKVEDSLLRSAYRFCHCNQVHTASLLGLSRNITRARL 340
           Q   A  R F  Q     EK   +L+      C  N+ H A++LG+S    R +L
Sbjct: 395 QAADAVTRSFVGQTVAAMEK---TLILDTLTHCLGNRTHAANILGISIRTLRNKL 446