Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 263 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  223 bits (569), Expect = 3e-63
 Identities = 120/249 (48%), Positives = 170/249 (68%), Gaps = 1/249 (0%)

Query: 6   LLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQGRIRF 65
           LLE+EG++  F GV A+ D+ F V  GEI A+IGPNGAGKS+L N+I GV R   G I+F
Sbjct: 10  LLEVEGLTCRFAGVTAVDDLSFRVKAGEIKAVIGPNGAGKSTLFNMIAGVTRPTDGAIKF 69

Query: 66  AGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLKRRSSWLEQALRIGRAP 125
            G +   +  HA AR GIARTFQN+ +F+ MSVL+NV+ GR+L+ R++ L   L I    
Sbjct: 70  DGARVDRLPTHARARRGIARTFQNLQIFREMSVLENVMVGRHLRGRATTLSALLHIPSVG 129

Query: 126 GEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLLLDEPMAGM 185
            E+    A A  ++E   +        G+L +G  K +ELARALA+EPRLLLLDEP AG+
Sbjct: 130 AEERAMEATAMALLERFGLAAKAGLPAGSLAFGQMKVLELARALASEPRLLLLDEPAAGL 189

Query: 186 NAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDGSPEQVRRN 245
              E  +M+  I ++NR+ GMTV+L+EH++ +VM +SH ++VL+ GR+I +G+ E VRR+
Sbjct: 190 PHAEADKMAETIRDLNRD-GMTVLLVEHNMRMVMSLSHDILVLNNGRRIAEGTAEDVRRH 248

Query: 246 PDVIAAYLG 254
           P+V++AYLG
Sbjct: 249 PEVLSAYLG 257