Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 274 a.a., Lipopolysaccharide export system ATP-binding protein LptB from Xanthobacter sp. DMC5

 Score =  193 bits (490), Expect = 4e-54
 Identities = 106/257 (41%), Positives = 160/257 (62%), Gaps = 5/257 (1%)

Query: 2   SNLPLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQG 61
           S+  +L +E + + F G+ AI+D+ F V EGEI +LIGPNGAGK++  NI+ G  +  QG
Sbjct: 5   SSSAILNVEHVGMKFGGLTAIADLHFDVHEGEILSLIGPNGAGKTTAFNIMTGFLKPTQG 64

Query: 62  RIRFAGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNL----KRRSSWLEQ 117
           R+ F G+      P+  AR G+ARTFQ  ++F   SV DNVL G +      R ++ L++
Sbjct: 65  RVLFRGRDLSQTRPNEIARLGLARTFQRTSVFADDSVRDNVLIGLHRFGDDTRATALLDR 124

Query: 118 ALRIGRAPGEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLL 177
                 A   ++  R  AE +I+ + +     +  G+L YG Q+ +  A ALA EP++LL
Sbjct: 125 LFPTPAARRAENAVRERAEAIIDMVGLSARAGDKAGSLSYGEQRLVGFALALAVEPKMLL 184

Query: 178 LDEPMAGMNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDG 237
           LDEP++GMNA E +   R I ++ R+ G+T++L+EHD+ +VM +S  +V L+YGR I +G
Sbjct: 185 LDEPVSGMNASETQGFVRLIRKV-RDEGVTILLVEHDMPMVMEVSDRIVCLNYGRLIAEG 243

Query: 238 SPEQVRRNPDVIAAYLG 254
            PE +R +P VI AYLG
Sbjct: 244 PPEAIRTDPKVIEAYLG 260