Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 254 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  183 bits (465), Expect = 3e-51
 Identities = 108/254 (42%), Positives = 149/254 (58%), Gaps = 6/254 (2%)

Query: 1   MSNLPLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQ 60
           MS    L++  IS+ F G+KA++ + F V +G I ALIGPNGAGKS+  N I+  Y    
Sbjct: 1   MSATAFLDVRDISVVFGGLKAVNGLSFEVEQGRIHALIGPNGAGKSTTFNCISRFYTPSS 60

Query: 61  GRIRFAGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLKRRSSWLEQALR 120
           G + F G++   + PH  A  GIARTFQN+ LF  +SVL+NVL G +  R ++ L + LR
Sbjct: 61  GSVTFEGRELTSVSPHRMASLGIARTFQNLELFAELSVLENVLLGTH-SRGAATLGRLLR 119

Query: 121 IGRAPGEDDRQRAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLLLDE 180
                 ED          +   R QP RD     L +G QK +ELARALA  P+LLLLDE
Sbjct: 120 RPDRETEDFAMHLLERVGLADERHQPARD-----LDFGRQKLLELARALAIRPKLLLLDE 174

Query: 181 PMAGMNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDGSPE 240
           P AG+   E   + R + E+    G+TV+L+EH + +VM IS  + V+ +G KI +G+P 
Sbjct: 175 PAAGLRNREIESLDRLLKELVARDGITVLLVEHVMQLVMSISDRITVMAFGEKIAEGTPS 234

Query: 241 QVRRNPDVIAAYLG 254
           ++  N  VI AYLG
Sbjct: 235 EIGSNARVIEAYLG 248