Pairwise Alignments

Query, 277 a.a., putative Branched-chain amino acid ABC transporter, ATP-binding protein from Pseudomonas putida KT2440

Subject, 256 a.a., Branched-chain amino acid transport ATP-binding protein LivG (TC 3.A.1.4.1) from Variovorax sp. SCN45

 Score =  180 bits (457), Expect = 2e-50
 Identities = 108/263 (41%), Positives = 158/263 (60%), Gaps = 12/263 (4%)

Query: 1   MSNLPLLELEGISLSFKGVKAISDIGFSVAEGEICALIGPNGAGKSSLLNIINGVYRAQQ 60
           MS   LL ++G+ + F G+ A+ D+ F V EGE+  L+GPNGAGK++LL +I+GV     
Sbjct: 1   MSADALLAIDGLGVRFGGIVAVHDVAFDVHEGELLGLLGPNGAGKTTLLRLISGVVAPTA 60

Query: 61  GRIRFAGQQRRVMHPHAAARDGIARTFQNIALFKGMSVLDNVLTGRNLK-RRSSWLEQAL 119
           G+IRF G+    ++    A+ GIA + Q +  F+ M++L+NV+     +  R+ W     
Sbjct: 61  GQIRFRGESLNRLNAAMRAQRGIALSHQIVRPFRNMTLLENVVFAAGSRITRTPW----- 115

Query: 120 RIGRAPGEDDRQ--RAAAERVIEFLRIQPWRDEIVGTLPYGLQKRIELARALAAEPRLLL 177
              RA    DR+  R  A R +E + I    D + G  P G+ KR+E+ARALA +PRLLL
Sbjct: 116 ---RALATLDRRSLRDEAMRCLELVGIGAQADRLPGAQPLGVLKRLEVARALATQPRLLL 172

Query: 178 LDEPMAGMNAEEKREMSRFIVEINREFGMTVVLIEHDIGVVMGISHHVVVLDYGRKIGDG 237
           LDEP+AG+   E   ++  I ++N   G+T+VLIEH++  VM I   +VVL+ GRK+ DG
Sbjct: 173 LDEPLAGLGHGEALRLADLIRQLNAS-GVTIVLIEHNLAEVMRICPRIVVLNNGRKMADG 231

Query: 238 SPEQVRRNPDVIAAYLGVRPAAA 260
              +V R+P VI AYLG   A A
Sbjct: 232 PAAEVMRDPAVIEAYLGEGAALA 254